RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 CNTFRP26992 372 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 ERCC8Q13216 396 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 GFRALQ6UXV0 394 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 C10orf126Q8N4M7 172 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 AJUBAQ96IF1 538 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 SLC50A1Q9BRV3 221 aa8.88□□□□□ -0.99
TNRC6A-205ENST00000464539 IGHV1-3A0A0C4DH29 117 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 NUP37Q8NFH4 326 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 SMIM2Q9BVW6 85 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 KAAG1Q9UBP8 84 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 DNHD1Q96M86 4753 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 DNAJC13O75165 2243 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 MBD3L4A6NDZ8 208 aaPredicted RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 MBD3L3A6NE82 208 aaPredicted RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 MBD3L5A6NJ08 208 aaPredicted RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 TMEM178BH3BS89 294 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 HLA-DMBP28068 263 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 EFNA4P52798 201 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 HERVK_113P61574 105 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 RPL32P62910 135 aaKnown RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 HERV-K104P63124 156 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 MBD3L2Q8NHZ7 208 aaPredicted RBP8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 TACC2O95359 2948 aa8.87□□□□□ -0.99
TNRC6A-205ENST00000464539 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 C19orf84I3L1E1 186 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 IGLV1-47P01700 117 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 LOXP28300 417 aaPredicted RBP8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 SHISA2Q6UWI4 295 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 Q8TAT8 98 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 IGFBPL1Q8WX77 278 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 DCHS2Q6V1P9 2916 aa8.86□□□□□ -0.99
TNRC6A-205ENST00000464539 C17orf100A8MU93 164 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 H3BVH4 76 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 SLC25A20O43772 301 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 CNIH1O95406 144 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 A0A0J9YY99 117 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 BUB1B-PAK6H3BSN5 160 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 CFC1BP0CG36 223 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 CFC1P0CG37 223 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 P0DMU3 169 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 ADORA2A-AS1P86434 159 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 BAALCQ8WXS3 180 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 VKORC1Q9BQB6 163 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 HIF1ANQ9NWT6 349 aa8.85□□□□□ -0.99
TNRC6A-205ENST00000464539 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 CCL8P80075 99 aa8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 SLC25A29Q8N8R3 303 aa8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 OR10J6PQ8NGY7 276 aa8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 PLEKHB2Q96CS7 222 aa8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 KIR2DL4Q99706 377 aa8.84□□□□□ -0.99
TNRC6A-205ENST00000464539 PPP1R17O96001 155 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 IGHV3-30P01768 117 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 TRGV3P03979 118 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 IGHV3-30-5P0DP03 117 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 CFHR4Q92496 578 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 SPANXDQ9BXN6 97 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 TMEM126AQ9H061 195 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 TNFRSF18Q9Y5U5 241 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 SMAD5-AS1Q9Y6J3 95 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 LINC01548A6NM66 108 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 CCDC179H3BU77 68 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 M0R381 172 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
TNRC6A-205ENST00000464539 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
TNRC6A-205ENST00000464539 LYPD2Q6UXB3 125 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 RASL10AQ92737 203 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 TIMD4Q96H15 378 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 ONECUT1Q9UBC0 465 aa8.83□□□□□ -1
TNRC6A-205ENST00000464539 AGRNO00468 2067 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 TRAV17A0A0B4J275 112 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 SPANXN1Q5VSR9 72 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 DYNAPQ8N1N2 210 aa8.82□□□□□ -1
TNRC6A-205ENST00000464539 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
TNRC6A-205ENST00000464539 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 SEM1Q6ZVN7 128 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 SPATA3Q8NHX4 192 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 C21orf62Q9NYP8 219 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 CTSZQ9UBR2 303 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 TRAV8-4A0A0B4J246 113 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 C9JAW5 83 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 PRTN3P24158 256 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 CDSNQ15517 529 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 ATXN8Q156A1 80 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 SFTA2Q6UW10 78 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 Q8N1Y9 231 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 NPBQ8NG41 125 aa8.81□□□□□ -1
TNRC6A-205ENST00000464539 MDFICQ9P1T7 246 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms