RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 Q8N976 141 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 PPP1R1CQ8WVI7 109 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 RMI2Q96E14 147 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 PARLQ9H300 379 aa11.33□□□□□ -0.6
HMGN1-210ENST00000464078 A8MWV9 139 aa11.32□□□□□ -0.6
HMGN1-210ENST00000464078 GCGP01275 180 aa11.32□□□□□ -0.6
HMGN1-210ENST00000464078 TCRAP04437 139 aa11.32□□□□□ -0.6
HMGN1-210ENST00000464078 H2BFSP57053 126 aa11.32□□□□□ -0.6
HMGN1-210ENST00000464078 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-210ENST00000464078 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
HMGN1-210ENST00000464078 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 IGLV2-11P01706 119 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 SEC11BP0C7V7 166 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 PET100P0DJ07 73 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 CIRBP-AS1Q8TBR5 109 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
HMGN1-210ENST00000464078 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 K7EQM0 130 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 MPC2O95563 127 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 RAB2AP61019 212 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 GAGE1Q13065 139 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 GAGE4Q13068 117 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 GAGE5Q13069 117 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 ZFP69Q49AA0 526 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
HMGN1-210ENST00000464078 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 RPL12P30050 165 aaKnown RBP11.29□□□□□ -0.6
HMGN1-210ENST00000464078 FGF8P55075 233 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-210ENST00000464078 SMUG1Q53HV7 270 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 UFSP1Q6NVU6 142 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 LINC00299Q6ZSB3 139 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
HMGN1-210ENST00000464078 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-210ENST00000464078 NIT1Q86X76 327 aa11.28□□□□□ -0.6
HMGN1-210ENST00000464078 ENKURQ8TC29 256 aa11.28□□□□□ -0.6
HMGN1-210ENST00000464078 CHCHD7Q9BUK0 85 aa11.28□□□□□ -0.6
HMGN1-210ENST00000464078 Q9UF83 564 aa11.28□□□□□ -0.6
HMGN1-210ENST00000464078 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
HMGN1-210ENST00000464078 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.6
HMGN1-210ENST00000464078 IGKV2D-24A0A075B6R9 120 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
HMGN1-210ENST00000464078 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 STAG3L3P0CL85 134 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 OR10G9Q8NGN4 311 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 OR10G7Q8NGN6 311 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
HMGN1-210ENST00000464078 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-210ENST00000464078 SAPCD1Q5SSQ6 148 aa11.26□□□□□ -0.61
HMGN1-210ENST00000464078 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-210ENST00000464078 OR2T35Q8NGX2 323 aa11.26□□□□□ -0.61
HMGN1-210ENST00000464078 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
HMGN1-210ENST00000464078 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
HMGN1-210ENST00000464078 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 RHODO00212 210 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 OR2G3Q8NGZ4 309 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
HMGN1-210ENST00000464078 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
HMGN1-210ENST00000464078 GCHFRP30047 84 aa11.24□□□□□ -0.61
HMGN1-210ENST00000464078 ASIPP42127 132 aa11.24□□□□□ -0.61
HMGN1-210ENST00000464078 ELOBQ15370 118 aa11.24□□□□□ -0.61
HMGN1-210ENST00000464078 LGALSLQ3ZCW2 172 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-210ENST00000464078 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
HMGN1-210ENST00000464078 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
HMGN1-210ENST00000464078 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
HMGN1-210ENST00000464078 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
HMGN1-210ENST00000464078 RAB24Q969Q5 203 aa11.23□□□□□ -0.61
HMGN1-210ENST00000464078 UBE2WQ96B02 151 aa11.23□□□□□ -0.61
HMGN1-210ENST00000464078 JPT2Q9H910 190 aa11.23□□□□□ -0.61
HMGN1-210ENST00000464078 A0A087WX48 190 aa11.22□□□□□ -0.61
HMGN1-210ENST00000464078 SUMO1P63165 101 aaKnown RBP11.22□□□□□ -0.61
HMGN1-210ENST00000464078 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
HMGN1-210ENST00000464078 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
HMGN1-210ENST00000464078 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
HMGN1-210ENST00000464078 TMEM167BQ9NRX6 74 aa11.22□□□□□ -0.61
HMGN1-210ENST00000464078 Q0VG73 95 aa11.21□□□□□ -0.61
HMGN1-210ENST00000464078 PSMG3Q9BT73 122 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-210ENST00000464078 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 H3BVH4 76 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 SSNA1O43805 119 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 UPK1BO75841 260 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
HMGN1-210ENST00000464078 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 ARL2-SNX15V9GYD0 113 aa11.2□□□□□ -0.62
HMGN1-210ENST00000464078 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
HMGN1-210ENST00000464078 C1orf43Q9BWL3 253 aa11.19□□□□□ -0.62
HMGN1-210ENST00000464078 A0A1W2PRE2 83 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms