RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
SMC1A-204ENST00000463684 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
SMC1A-204ENST00000463684 MT1HL1P0DM35 61 aa9.38□□□□□ -0.91
SMC1A-204ENST00000463684 Q6ZRU5 148 aa9.38□□□□□ -0.91
SMC1A-204ENST00000463684 NIT1Q86X76 327 aa9.38□□□□□ -0.91
SMC1A-204ENST00000463684 OR2T35Q8NGX2 323 aa9.38□□□□□ -0.91
SMC1A-204ENST00000463684 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 A0A087WX48 190 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 A8MWV9 139 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 TCRBP04435 133 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 Q0VG73 95 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 FFAR4Q5NUL3 377 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 PARLQ9H300 379 aa9.37□□□□□ -0.91
SMC1A-204ENST00000463684 IL7P13232 177 aa9.36□□□□□ -0.91
SMC1A-204ENST00000463684 LGALSLQ3ZCW2 172 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-204ENST00000463684 SGK494Q96LW2 274 aa9.36□□□□□ -0.91
SMC1A-204ENST00000463684 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-204ENST00000463684 SAMD10Q9BYL1 202 aa9.36□□□□□ -0.91
SMC1A-204ENST00000463684 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
SMC1A-204ENST00000463684 LYRM1O43325 122 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-204ENST00000463684 ATRAIDQ6UW56 229 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 NUDT15Q9NV35 164 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 Q9UF83 564 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 RNF213Q63HN8 5207 aa9.35□□□□□ -0.91
SMC1A-204ENST00000463684 A0A0D9SG52 128 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 PLA2G10O15496 165 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 GCGP01275 180 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
SMC1A-204ENST00000463684 S100A4P26447 101 aaKnown RBP9.34□□□□□ -0.91
SMC1A-204ENST00000463684 GNG5P63218 68 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 ZFP69Q49AA0 526 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
SMC1A-204ENST00000463684 TMEM75Q8N9X5 138 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 LINC00479Q96M42 142 aa9.34□□□□□ -0.91
SMC1A-204ENST00000463684 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 K7EQM0 130 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMC1A-204ENST00000463684 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 PQLC2Q6ZP29 291 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 OR5AC2Q9NZP5 309 aa9.33□□□□□ -0.92
SMC1A-204ENST00000463684 LRP2P98164 4655 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 OR2G3Q8NGZ4 309 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 ZC2HC1AQ96GY0 325 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
SMC1A-204ENST00000463684 CRPP02741 224 aa9.31□□□□□ -0.92
SMC1A-204ENST00000463684 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
SMC1A-204ENST00000463684 HSD17B11Q8NBQ5 300 aa9.31□□□□□ -0.92
SMC1A-204ENST00000463684 JPT2Q9H910 190 aa9.31□□□□□ -0.92
SMC1A-204ENST00000463684 PSG8Q9UQ74 426 aa9.31□□□□□ -0.92
SMC1A-204ENST00000463684 USP17L23D6RBM5 183 aa9.3□□□□□ -0.92
SMC1A-204ENST00000463684 RHODO00212 210 aa9.3□□□□□ -0.92
SMC1A-204ENST00000463684 ASIPP42127 132 aa9.3□□□□□ -0.92
SMC1A-204ENST00000463684 UFSP1Q6NVU6 142 aa9.3□□□□□ -0.92
SMC1A-204ENST00000463684 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
SMC1A-204ENST00000463684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
SMC1A-204ENST00000463684 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 TCRAP04437 139 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 PRSS1P07477 247 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 PRNTQ86SH4 94 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 OR10G7Q8NGN6 311 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
SMC1A-204ENST00000463684 SIX6O95475 246 aa9.28□□□□□ -0.92
SMC1A-204ENST00000463684 FLI1Q01543 452 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-204ENST00000463684 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
SMC1A-204ENST00000463684 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
SMC1A-204ENST00000463684 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
SMC1A-204ENST00000463684 H0YIZ8 118 aa9.27□□□□□ -0.93
SMC1A-204ENST00000463684 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 ANGP03950 147 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 RPL19P84098 196 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 SDIM1Q6ZPB5 146 aa9.27□□□□□ -0.93
SMC1A-204ENST00000463684 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
SMC1A-204ENST00000463684 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
SMC1A-204ENST00000463684 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 FABP5P3A8MUU1 101 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 PANO1I0J062 215 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 SMIM3Q9BZL3 60 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 HSPB11Q9Y547 144 aa9.26□□□□□ -0.93
SMC1A-204ENST00000463684 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
SMC1A-204ENST00000463684 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
SMC1A-204ENST00000463684 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
SMC1A-204ENST00000463684 MIAQ16674 131 aa9.25□□□□□ -0.93
SMC1A-204ENST00000463684 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms