RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 UBBP0CG47 229 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 SDC2P34741 201 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 Q6ZS52 159 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 LINC00305Q7Z4B0 112 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 LYPD1Q8N2G4 141 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 MRPL16Q9NX20 251 aaKnown RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 NAT8Q9UHE5 227 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 TEP1Q99973 2627 aaKnown RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 A0A0G2JQZ4 141 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 ODAMA1E959 279 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 TCEAL2Q9H3H9 227 aaPredicted RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 TAS2R4Q9NYW5 299 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 CHCHD2Q9Y6H1 151 aaPredicted RBP1.43□□□□□ -2.18
SMC4-203ENST00000462668 PLXNB1O43157 2135 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 UBR4Q5T4S7 5183 aa1.43□□□□□ -2.18
SMC4-203ENST00000462668 CREBL2O60519 120 aaPredicted RBP1.42□□□□□ -2.18
SMC4-203ENST00000462668 ZNF737O75373 536 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 DSCR4P56555 118 aaPredicted RBP1.42□□□□□ -2.18
SMC4-203ENST00000462668 LINC00269Q8N2A0 174 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 CACYBPQ9HB71 228 aaKnown RBP1.42□□□□□ -2.18
SMC4-203ENST00000462668 COPZ2Q9P299 210 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 TNXBP22105 4242 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 MYH7P12883 1935 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 MYH6P13533 1939 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 C5orf58C9J3I9 102 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 BAALC-AS2P0C853 105 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 TEN1Q86WV5 123 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 NPCDR1Q9BY65 106 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 U3KQ87 197 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 CEP290O15078 2479 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 TGP01266 2768 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 IGKV1D-42A0A075B6H8 117 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 E7EUB6 86 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 LINC00304Q8N9R0 145 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 OR8B3Q8NGG8 313 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 SDF2Q99470 211 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 FAM107BQ9H098 131 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 TET1Q8NFU7 2136 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 RELAQ04206 551 aa1.42□□□□□ -2.18
SMC4-203ENST00000462668 ANAPC1Q9H1A4 1944 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 MYH4Q9Y623 1939 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 CTSGP08311 255 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 IGLC6P0CF74 106 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 LINC00694P0DN24 101 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 FOXA3P55318 350 aaPredicted RBP1.41□□□□□ -2.18
SMC4-203ENST00000462668 CNBPP62633 177 aaKnown RBP1.41□□□□□ -2.18
SMC4-203ENST00000462668 TMEM91Q6ZNR0 172 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 TCTE3Q8IZS6 198 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 TIMM9Q9Y5J7 89 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 TRAV13-1A0A0B4J241 112 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 K7ERJ3 54 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 RPL13AP3Q6NVV1 102 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 C10orf111Q8N326 155 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 BCL2L10Q9HD36 194 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 C14orf132Q9NPU4 83 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 HRNRQ86YZ3 2850 aaPredicted RBP1.41□□□□□ -2.18
SMC4-203ENST00000462668 DSPPQ9NZW4 1301 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 HERC1Q15751 4861 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 TRAV12-1A0A0B4J245 112 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 SPANXN5Q5MJ07 72 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 BPIFA4PQ86YQ2 179 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 DNAJC15Q9Y5T4 150 aa1.41□□□□□ -2.18
SMC4-203ENST00000462668 IGKV3D-11A0A0A0MRZ8 115 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 MIF4GDA9UHW6 222 aaKnown RBP1.4□□□□□ -2.18
SMC4-203ENST00000462668 DLEU1O43261 78 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 NDUFA5Q16718 116 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 FAM216BQ8N7L0 139 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 HYLS1Q96M11 299 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 GGACTQ9BVM4 153 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.18
SMC4-203ENST00000462668 A0A1B0GV90 55 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 H3BMG7 143 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 UQCRQO14949 82 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 ZNF846Q147U1 533 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 Q1T7F1 81 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 OR10AC1Q8NH08 325 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 KTN1Q86UP2 1357 aaKnown RBP1.4□□□□□ -2.19
SMC4-203ENST00000462668 HEATR5AQ86XA9 2040 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 HIVEP1P15822 2718 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 KIAA0100Q14667 2235 aaKnown RBP1.4□□□□□ -2.19
SMC4-203ENST00000462668 IGLV6-57P01721 117 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 OR51A4Q8NGJ6 313 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 LINC00167Q96N53 147 aa1.4□□□□□ -2.19
SMC4-203ENST00000462668 TENM2Q9NT68 2774 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 IGKV2D-26A0A0A0MRZ7 120 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 PITX3O75364 302 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 IFNGP01579 166 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 ESRGQ1W209 222 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 TMEM244Q5VVB8 128 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 PFDN5Q99471 154 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 SLC50A1Q9BRV3 221 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 MUC2Q02817 5179 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 OTOGLQ3ZCN5 2332 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 C17orf112F2Z3M2 114 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 SLC25A5P05141 298 aaKnown RBP1.39□□□□□ -2.19
SMC4-203ENST00000462668 AKR1D1P51857 326 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 OR5D16Q8NGK9 328 aa1.39□□□□□ -2.19
SMC4-203ENST00000462668 CCDC171Q6TFL3 1326 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms