RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CD28P10747 220 aa11.16□□□□□ -0.62
NCL-207ENST00000461347 NPC2P61916 151 aa11.16□□□□□ -0.62
NCL-207ENST00000461347 HIGD1BQ9P298 99 aa11.16□□□□□ -0.62
NCL-207ENST00000461347 PCSK5Q92824 1860 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 FRYLO94915 3013 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 PTPRBP23467 1997 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 A0A0U1RRA0 63 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 B5MCH6 92 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 FGF6P10767 208 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 KLHL30-AS1Q8NEE0 82 aa11.15□□□□□ -0.62
NCL-207ENST00000461347 RBAKDNA6NC62 111 aa11.15□□□□□ -0.63
NCL-207ENST00000461347 DUX3Q96PT4 197 aa11.15□□□□□ -0.63
NCL-207ENST00000461347 USP9YO00507 2555 aaPredicted RBP11.15□□□□□ -0.63
NCL-207ENST00000461347 C9JAW5 83 aa11.14□□□□□ -0.63
NCL-207ENST00000461347 IGF2-ASQ6U949 168 aa11.14□□□□□ -0.63
NCL-207ENST00000461347 SMIM20Q8N5G0 67 aa11.14□□□□□ -0.63
NCL-207ENST00000461347 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
NCL-207ENST00000461347 PMVKQ15126 192 aa11.14□□□□□ -0.63
NCL-207ENST00000461347 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
NCL-207ENST00000461347 ZFP36P26651 326 aaKnown RBP11.13□□□□□ -0.63
NCL-207ENST00000461347 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
NCL-207ENST00000461347 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
NCL-207ENST00000461347 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
NCL-207ENST00000461347 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
NCL-207ENST00000461347 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 SPXQ9BT56 116 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 CENPVL3A0A0U1RRI6 287 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
NCL-207ENST00000461347 DUSP14O95147 198 aaKnown RBP11.12□□□□□ -0.63
NCL-207ENST00000461347 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
NCL-207ENST00000461347 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
NCL-207ENST00000461347 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
NCL-207ENST00000461347 DSPP15924 2871 aaKnown RBP11.11□□□□□ -0.63
NCL-207ENST00000461347 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 AGRNO00468 2067 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 USP9XQ93008 2570 aaPredicted RBP11.1□□□□□ -0.63
NCL-207ENST00000461347 CHD8Q9HCK8 2581 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 NDUFA4O00483 81 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 U3KQK5 164 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 HIVEP3Q5T1R4 2406 aa11.1□□□□□ -0.63
NCL-207ENST00000461347 A0A096LNJ9 63 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 FRYQ5TBA9 3013 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 KNCNA6PVL3 124 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
NCL-207ENST00000461347 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
NCL-207ENST00000461347 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 LINC01587Q99440 93 aa11.09□□□□□ -0.63
NCL-207ENST00000461347 CCDC168Q8NDH2 2452 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 TNFRSF13BO14836 293 aaPredicted RBP11.08□□□□□ -0.64
NCL-207ENST00000461347 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 J3QQQ9 107 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 IGF1P05019 195 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 RPL39P62891 51 aaKnown RBP11.08□□□□□ -0.64
NCL-207ENST00000461347 C9orf47Q6ZRZ4 202 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 PPDPFLQ8WWR9 84 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
NCL-207ENST00000461347 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 PRO1854Q9UHT4 67 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
NCL-207ENST00000461347 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 ZFAND6Q6FIF0 208 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 UNQ9165/PRO28630Q6UXU0 137 aa11.07□□□□□ -0.64
NCL-207ENST00000461347 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 ODF3BA8MYP8 253 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
NCL-207ENST00000461347 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 WDFY3Q8IZQ1 3526 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 HERV-K104P63124 156 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
NCL-207ENST00000461347 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
NCL-207ENST00000461347 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
NCL-207ENST00000461347 LGALS1P09382 135 aaKnown RBP11.05□□□□□ -0.64
NCL-207ENST00000461347 JPT2Q9H910 190 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms