RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 KRTAP21-3Q3LHN1 58 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 Q6ZSV7 163 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 MDC1Q14676 2089 aaKnown RBP3.68□□□□□ -1.82
EPHA3-202ENST00000452448 TECTAO75443 2155 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.68□□□□□ -1.82
EPHA3-202ENST00000452448 TMEM30CPA0ZSE6 113 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ATP1A1-AS1Q5TC04 95 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ZNF818PQ6ZRF7 136 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 NDUFA11Q86Y39 141 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 LYPD6Q86Y78 171 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 RPRMLQ8N4K4 120 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ZNF525Q8N782 197 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ZNF491Q8N8L2 437 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ITLN1Q8WWA0 313 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 ITLN2Q8WWU7 325 aaPredicted RBP3.68□□□□□ -1.82
EPHA3-202ENST00000452448 DIRC1Q969H9 104 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 MAP6D1Q9H9H5 199 aa3.68□□□□□ -1.82
EPHA3-202ENST00000452448 C17orf51A8MQB3 221 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 CLPSP04118 112 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 REG3AQ06141 175 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 LINC01554Q52M75 96 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 CCL4L1Q8NHW4 92 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 CYYR1Q96J86 154 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 DKK2Q9UBU2 259 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 EML5Q05BV3 1969 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 MYOFQ9NZM1 2061 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 NOTCH4Q99466 2003 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 TMEM14DPA8MWL7 114 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 E7EUB6 86 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 TRBV12-3P01733 135 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 FGF12P61328 243 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 NNATQ16517 81 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 FOXL2NBQ6ZUU3 175 aa3.67□□□□□ -1.82
EPHA3-202ENST00000452448 ZNF71Q9NQZ8 489 aaPredicted RBP3.67□□□□□ -1.82
EPHA3-202ENST00000452448 HEATR5BQ9P2D3 2071 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 TRAV13-2A0A0B4J235 113 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 F8WEM9 126 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 BRWD1-AS2P59051 145 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 MRPS21P82921 87 aaKnown RBP3.66□□□□□ -1.82
EPHA3-202ENST00000452448 ESRGQ1W209 222 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 C11orf52Q96A22 123 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 MED13Q9UHV7 2174 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 H3BSH0 61 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 J3QKU1 62 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 IGKV3-11P04433 115 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 RPS27P42677 84 aaKnown RBP3.66□□□□□ -1.82
EPHA3-202ENST00000452448 UBE2AP49459 152 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 FAM216BQ8N7L0 139 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 FAM168AQ92567 244 aa3.66□□□□□ -1.82
EPHA3-202ENST00000452448 MRPL35Q9NZE8 188 aaKnown RBP3.66□□□□□ -1.82
EPHA3-202ENST00000452448 FAM208BQ5VWN6 2430 aa3.65□□□□□ -1.82
EPHA3-202ENST00000452448 MPDZO75970 2070 aa3.65□□□□□ -1.82
EPHA3-202ENST00000452448 IGKV3D-11A0A0A0MRZ8 115 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 A0A0J9YXV3 536 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 A6NN06 94 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 ZNHIT1O43257 154 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
EPHA3-202ENST00000452448 DEFB110Q30KQ9 67 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 CRIP3Q6Q6R5 217 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 Q6ZPA2 131 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 CLEC2BQ92478 149 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 C10orf142B7Z368 130 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 E7EQL1 145 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 NDUFC1O43677 76 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 CD24P25063 80 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
EPHA3-202ENST00000452448 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.65□□□□□ -1.83
EPHA3-202ENST00000452448 ZNF497Q6ZNH5 498 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 PATE1Q8WXA2 126 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.83
EPHA3-202ENST00000452448 ATRXP46100 2492 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 A0A096LNJ9 63 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 A0A0G2JRQ6 117 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 SPTY2D1-AS1A0A0U1RR47 76 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 H7C423 109 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 COX7A2P2O60397 106 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 PRSS2P07478 247 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
EPHA3-202ENST00000452448 TWIST1Q15672 202 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 PRRC2BQ5JSZ5 2229 aaKnown RBP3.64□□□□□ -1.83
EPHA3-202ENST00000452448 CACNA1IQ9P0X4 2223 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 FER1L5A0AVI2 2057 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 CHD8Q9HCK8 2581 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 IGKV1-27A0A075B6S5 117 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 A0A087WVE0 104 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 IGHV1-45A0A0A0MS14 117 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 PLA2G2AP14555 144 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 ZNRF1Q8ND25 227 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 FAM186AA6NE01 2351 aa3.64□□□□□ -1.83
EPHA3-202ENST00000452448 NACAE9PAV3 2078 aa3.63□□□□□ -1.83
EPHA3-202ENST00000452448 TRAV3A0A0B4J244 114 aa3.63□□□□□ -1.83
EPHA3-202ENST00000452448 IGLV3-19P01714 112 aa3.63□□□□□ -1.83
EPHA3-202ENST00000452448 GNLYP22749 145 aa3.63□□□□□ -1.83
EPHA3-202ENST00000452448 ZFP36P26651 326 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms