RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	SAMD13	Q5VXD3	122 aa		12.71	□□□□□ -0.37
TOM1-210	ENST00000449058	TOMM6	Q96B49	74 aa		12.71	□□□□□ -0.37
TOM1-210	ENST00000449058	AP1S3	Q96PC3	154 aa		12.71	□□□□□ -0.37
TOM1-210	ENST00000449058	IGHV4-59	P01825	116 aa		12.71	□□□□□ -0.38
TOM1-210	ENST00000449058	ID1	P41134	155 aa		12.71	□□□□□ -0.38
TOM1-210	ENST00000449058	PLN	P26678	52 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	DEFB112	Q30KQ8	113 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	MUC4	Q99102	2169 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	CELSR2	Q9HCU4	2923 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	FLNC	Q14315	2725 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	NRGN	Q92686	78 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	JMJD8	Q96S16	334 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	CHAC1	Q9BUX1	264 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	KIF25-AS1	Q9Y6Z4	181 aa		12.7	□□□□□ -0.38
TOM1-210	ENST00000449058	TRBV25-1	A0A075B6N4	114 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	MGP	P08493	103 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	CDKN1B	P46527	198 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	SPG11	Q96JI7	2443 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	TMEM89	A2RUT3	159 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	UFSP1	Q6NVU6	142 aa		12.69	□□□□□ -0.38
TOM1-210	ENST00000449058	IGSF10	Q6WRI0	2623 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058		A0A096LNT2	108 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058		H7C1H1	209 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058	PPP1R17	O96001	155 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058	LINC00315	P59091	139 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058	LINC01356	Q8N9X3	169 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058	SCGB3A1	Q96QR1	104 aa		12.68	□□□□□ -0.38
TOM1-210	ENST00000449058	USP9X	Q93008	2570 aa	Predicted RBP	12.68	□□□□□ -0.38
TOM1-210	ENST00000449058		F8VRH5	84 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058		H3BUT2	72 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058	ACACB	O00763	2458 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058	C10orf99	Q6UWK7	81 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058	NEXN-AS1	Q8NBZ9	246 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058	CST9L	Q9H4G1	147 aa		12.67	□□□□□ -0.38
TOM1-210	ENST00000449058	GAGE10	A6NGK3	116 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	FAM159A	Q6UWV7	190 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	MAPKAPK5-AS1	Q8N8E1	139 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	IGHV4OR15-8	A0A075B7B6	117 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058		A0A087WW49	117 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	FXYD2	P54710	66 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	ODF3	Q96PU9	254 aa		12.66	□□□□□ -0.38
TOM1-210	ENST00000449058	MAP1A	P78559	2803 aa	Predicted RBP	12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	GAGE12B	A1L429	117 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	GCSH	P23434	173 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	RPL32	P62910	135 aa	Known RBP	12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	C2orf66	Q6UXQ4	117 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058		J3QLI3	93 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	GTF2H5	Q6ZYL4	71 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	RAB37	Q96AX2	223 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	TM2D2	Q9BX73	214 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058	CSTL1	Q9H114	145 aa		12.65	□□□□□ -0.38
TOM1-210	ENST00000449058		K7EP34	96 aa		12.64	□□□□□ -0.39
TOM1-210	ENST00000449058	NAA38	Q9BRA0	125 aa	Known RBP	12.64	□□□□□ -0.39
TOM1-210	ENST00000449058	SMIM13	P0DJ93	91 aa		12.64	□□□□□ -0.39
TOM1-210	ENST00000449058	CSPG4	Q6UVK1	2322 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	TRAV12-3	A0A0B4J271	114 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	BAALC	Q8WXS3	180 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058		A0A0J9YX75	114 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058		A0A1W2PPM0	123 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	ZNF688	P0C7X2	276 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	OCIAD2	Q56VL3	154 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	CEND1	Q8N111	149 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058	WFDC12	Q8WWY7	111 aa		12.63	□□□□□ -0.39
TOM1-210	ENST00000449058		K7EQG2	157 aa		12.62	□□□□□ -0.39
TOM1-210	ENST00000449058	CD7	P09564	240 aa		12.62	□□□□□ -0.39
TOM1-210	ENST00000449058	JPT2	Q9H910	190 aa		12.62	□□□□□ -0.39
TOM1-210	ENST00000449058	TAL2	Q16559	108 aa		12.62	□□□□□ -0.39
TOM1-210	ENST00000449058	UTP20	O75691	2785 aa	Known RBP	12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	POLR2K	P53803	58 aa	Known RBP	12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	SUMO4	Q6EEV6	95 aa		12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	CFAP161	Q6P656	301 aa		12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	C9orf85	Q96MD7	179 aa		12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	TGFA	P01135	160 aa		12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	SNRPD3	P62318	126 aa	Known RBP	12.61	□□□□□ -0.39
TOM1-210	ENST00000449058	IGHV3-16	A0A0C4DH30	117 aa		12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	PRSS29P	A6NIE9	313 aa		12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	LGALS9	O00182	355 aa		12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	LGALS1	P09382	135 aa	Known RBP	12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	NEGR1	Q7Z3B1	354 aa		12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	VPREB3	Q9UKI3	123 aa		12.6	□□□□□ -0.39
TOM1-210	ENST00000449058	FSHB	P01225	129 aa		12.59	□□□□□ -0.39
TOM1-210	ENST00000449058	CRYBG3	Q68DQ2	2970 aa		12.59	□□□□□ -0.39
TOM1-210	ENST00000449058	CYSLTR1	Q9Y271	337 aa		12.59	□□□□□ -0.39
TOM1-210	ENST00000449058		A0A087WWL8	130 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	OR11H12	B2RN74	326 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	LINC01619	G3V211	115 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	SYNJ2BP	P57105	145 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	SAMD5	Q5TGI4	173 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	OR11H1	Q8NG94	326 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	OR11H2	Q8NH07	326 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	LINC01549	A6NIU2	74 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	DUSP14	O95147	198 aa	Known RBP	12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	ELANE	P08246	267 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	ZFP2	Q6ZN57	461 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	MAPK1IP1L	Q8NDC0	245 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	OR5A1	Q8NGJ0	315 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	ZNF702P	Q9H963	129 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	SPCS1	Q9Y6A9	102 aa		12.58	□□□□□ -0.4
TOM1-210	ENST00000449058	TRAV12-2	A0A075B6T6	113 aa		12.57	□□□□□ -0.4

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