RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 Q86TA4 180 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 TNFRSF18Q9Y5U5 241 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
VCP-203ENST00000448530 ASIPP42127 132 aa13.38□□□□□ -0.27
VCP-203ENST00000448530 TIRAPP58753 221 aa13.38□□□□□ -0.27
VCP-203ENST00000448530 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
VCP-203ENST00000448530 C10orf126Q8N4M7 172 aa13.38□□□□□ -0.27
VCP-203ENST00000448530 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
VCP-203ENST00000448530 RYR1P21817 5038 aa13.37□□□□□ -0.27
VCP-203ENST00000448530 TRAV8-6A0A0B4J262 113 aa13.37□□□□□ -0.27
VCP-203ENST00000448530 CRYGDP07320 174 aa13.37□□□□□ -0.27
VCP-203ENST00000448530 MGST1P10620 155 aaKnown RBP13.37□□□□□ -0.27
VCP-203ENST00000448530 UBE2G1P62253 170 aa13.37□□□□□ -0.27
VCP-203ENST00000448530 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
VCP-203ENST00000448530 IGHV3-38A0A0C4DH36 116 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 B4DEV8 164 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 SMLR1H3BR10 107 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 LGALSLQ3ZCW2 172 aaPredicted RBP13.36□□□□□ -0.27
VCP-203ENST00000448530 CST9LP1Q5W188 147 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 FMC1Q96HJ9 113 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 PGPEP1Q9NXJ5 209 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 ZFP30Q9Y2G7 519 aa13.36□□□□□ -0.27
VCP-203ENST00000448530 IGKV3D-20A0A0C4DH25 116 aa13.35□□□□□ -0.27
VCP-203ENST00000448530 A8MWV9 139 aa13.35□□□□□ -0.27
VCP-203ENST00000448530 OR10J3Q5JRS4 329 aa13.35□□□□□ -0.27
VCP-203ENST00000448530 MAPKAPK5-AS1Q8N8E1 139 aa13.35□□□□□ -0.27
VCP-203ENST00000448530 TCEAL7Q9BRU2 100 aa13.35□□□□□ -0.27
VCP-203ENST00000448530 ZNF345Q14585 488 aa13.34□□□□□ -0.27
VCP-203ENST00000448530 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
VCP-203ENST00000448530 KCNRGQ8N5I3 272 aa13.34□□□□□ -0.27
VCP-203ENST00000448530 M0R036 132 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 FHITP49789 147 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 FAM162BQ5T6X4 162 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 ZFP2Q6ZN57 461 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 SYT8Q8NBV8 401 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 ATP6V0E2Q8NHE4 81 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 ZC2HC1AQ96GY0 325 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 PARLQ9H300 379 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 IL36BQ9NZH7 164 aa13.33□□□□□ -0.28
VCP-203ENST00000448530 H3BVH4 76 aa13.32□□□□□ -0.28
VCP-203ENST00000448530 LINC01556Q5JQF7 62 aa13.32□□□□□ -0.28
VCP-203ENST00000448530 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
VCP-203ENST00000448530 A0A087WTM6 91 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 A0A0D9SG52 128 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 KANTRA0A1W2PQU2 76 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 UMAD1C9J7I0 102 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 SH2D1AO60880 128 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 AKR1C3P42330 323 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 LELP1Q5T871 98 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 SFT2D1Q8WV19 159 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 ZNF471Q9BX82 626 aaPredicted RBP13.31□□□□□ -0.28
VCP-203ENST00000448530 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
VCP-203ENST00000448530 HMSDA8MTL9 139 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 KRBOX1C9JBD0 128 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 PSCAO43653 123 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 PAGE4O60829 102 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 CRIP1P50238 77 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 COX8CQ7Z4L0 72 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
VCP-203ENST00000448530 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 ARMS2P0C7Q2 107 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 EIF5AP63241 154 aaKnown RBP13.29□□□□□ -0.28
VCP-203ENST00000448530 DNLZQ5SXM8 178 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 KRTAP4-5Q9BYR2 181 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 PHLDA3Q9Y5J5 127 aa13.29□□□□□ -0.28
VCP-203ENST00000448530 A0A1B0GV50 99 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 GAGE12JA6NER3 117 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 RHODO00212 210 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 BCL2L11O43521 198 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 PFDN1O60925 122 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 LTAP01374 205 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 TPT1P13693 172 aaKnown RBP13.28□□□□□ -0.28
VCP-203ENST00000448530 GAGE1Q13065 139 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 GAGE4Q13068 117 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 GAGE5Q13069 117 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 GAGE13Q4V321 117 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 Q6ZSN1 163 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
VCP-203ENST00000448530 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 IBA57-AS1B1ANH7 110 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 IGHV3-30P01768 117 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 IGHV3-33P01772 117 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
VCP-203ENST00000448530 IGHV3-30-3P0DP02 117 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 IGHV3-30-5P0DP03 117 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 FUSP35637 526 aaKnown RBP eCLIP13.27□□□□□ -0.293e-7■■□□□ 13.8
VCP-203ENST00000448530 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 MBD3L1Q8WWY6 194 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 JPT2Q9H910 190 aa13.27□□□□□ -0.29
VCP-203ENST00000448530 FAM74A4Q5TZK3 123 aa13.26□□□□□ -0.29
VCP-203ENST00000448530 Q8N1X5 172 aa13.26□□□□□ -0.29
VCP-203ENST00000448530 SAMD10Q9BYL1 202 aa13.26□□□□□ -0.29
VCP-203ENST00000448530 Q9HAA7 133 aa13.26□□□□□ -0.29
VCP-203ENST00000448530 SCRT2Q9NQ03 307 aa13.26□□□□□ -0.29
VCP-203ENST00000448530 HSPG2P98160 4391 aa13.25□□□□□ -0.29
VCP-203ENST00000448530 M0R381 172 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms