RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 LINC00643Q86TS7 51 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 RIF1Q5UIP0 2472 aaKnown RBP3.81□□□□□ -1.8
SRRM1-203ENST00000447431 RP1L1Q8IWN7 2480 aaPredicted RBP3.81□□□□□ -1.8
SRRM1-203ENST00000447431 LEPROTO15243 131 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-33P01772 117 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 PAX8Q06710 450 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 FHL3Q13643 280 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 TRPT1Q86TN4 253 aaKnown RBP3.81□□□□□ -1.8
SRRM1-203ENST00000447431 EEF1AKMT3Q96AZ1 226 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
SRRM1-203ENST00000447431 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
SRRM1-203ENST00000447431 TRGV11A0A075B6L2 103 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 DIAPH2-AS1Q14236 149 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 DYNAPQ8N1N2 210 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 IGFBPL1Q8WX77 278 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-35A0A0C4DH35 117 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 TEX49A0A1B0GTD5 131 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 NDUFA7O95182 113 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-30P01768 117 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 TRGV3P03979 118 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-30-5P0DP03 117 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 ZNF80P51504 273 aaPredicted RBP3.8□□□□□ -1.8
SRRM1-203ENST00000447431 IGFL4Q6B9Z1 124 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 DYSFO75923 2080 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 SPTBN5Q9NRC6 3674 aaKnown RBP3.8□□□□□ -1.8
SRRM1-203ENST00000447431 CADP27708 2225 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 PATE3B3GLJ2 98 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 CNTFRP26992 372 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 MUSTN1Q8IVN3 82 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 FAM110DQ8TAY7 271 aaPredicted RBP3.8□□□□□ -1.8
SRRM1-203ENST00000447431 NRGNQ92686 78 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 AJUBAQ96IF1 538 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 AGPAT4-IT1Q9H0P7 198 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 VPREB3Q9UKI3 123 aa3.8□□□□□ -1.8
SRRM1-203ENST00000447431 LOXP28300 417 aaPredicted RBP3.79□□□□□ -1.8
SRRM1-203ENST00000447431 ID1P41134 155 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 ECSCRQ19T08 205 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 TMEM219Q86XT9 240 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 NRACQ8N912 160 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 SPRY4Q9C004 299 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 ICOSQ9Y6W8 199 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 EP300Q09472 2414 aaPredicted RBP3.79□□□□□ -1.8
SRRM1-203ENST00000447431 SDHAF1A6NFY7 115 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 CDX4O14627 284 aaPredicted RBP3.79□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-23P01764 117 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 LY6DQ14210 128 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 LPAL2Q16609 132 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 OVOL2Q9BRP0 275 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 IGLV2-18A0A075B6J9 118 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
SRRM1-203ENST00000447431 NAV3Q8IVL0 2385 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3OR16-8A0A075B7F1 116 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 IGHV3-74A0A0B4J1X5 117 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 SMIM9A6NGZ8 99 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 OOSP1A8MZH6 123 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 ZNF883P0CG24 379 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 RHOHQ15669 191 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 Q6ZS46 218 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 RASL10AQ92737 203 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 BDP1A6H8Y1 2624 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 ZGRF1Q86YA3 2104 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 IGKV3D-20A0A0C4DH25 116 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 MRPS12O15235 138 aaKnown RBP3.78□□□□□ -1.8
SRRM1-203ENST00000447431 NHLRC4P0CG21 123 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-203ENST00000447431 RNASE4P34096 147 aaKnown RBP3.78□□□□□ -1.8
SRRM1-203ENST00000447431 DUX3Q96PT4 197 aa3.78□□□□□ -1.8
SRRM1-203ENST00000447431 TNRC18O15417 2968 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-203ENST00000447431 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.81
SRRM1-203ENST00000447431 IGLV11-55A0A075B6I3 123 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 TRAV12-3A0A0B4J271 114 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 IGHV3-66A0A0C4DH42 116 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 A0A1B0GX51 115 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 CRYGBP07316 175 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 CD28P10747 220 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 C15orf32Q32M92 178 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 LYPD2Q6UXB3 125 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 Q6ZQT7 251 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 C9orf47Q6ZRZ4 202 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 C3orf56Q8N813 242 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 RNASE6Q93091 150 aaKnown RBP3.77□□□□□ -1.81
SRRM1-203ENST00000447431 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 LINC00527Q9UJ94 153 aa3.77□□□□□ -1.81
SRRM1-203ENST00000447431 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms