RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 BUB3O43684 328 aa10.79□□□□□ -0.68
MCF2L-218ENST00000442625 PRR9Q5T870 116 aa10.79□□□□□ -0.68
MCF2L-218ENST00000442625 ATP6V0E1O15342 81 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 RPL39LQ96EH5 51 aaKnown RBP10.78□□□□□ -0.68
MCF2L-218ENST00000442625 ZFAND3Q9H8U3 227 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 M0R381 172 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 ZNF502Q8TBZ5 544 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 TRAV8-2A0A0B4J237 113 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 NHLRC4P0CG21 123 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-218ENST00000442625 EMP1P54849 157 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 GAGE13Q4V321 117 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 C20orf78Q9BR46 151 aa10.78□□□□□ -0.68
MCF2L-218ENST00000442625 CLPSL1A2RUU4 121 aa10.77□□□□□ -0.69
MCF2L-218ENST00000442625 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.69
MCF2L-218ENST00000442625 F8W1H4 67 aa10.77□□□□□ -0.69
MCF2L-218ENST00000442625 CCDC140Q96MF4 163 aa10.77□□□□□ -0.69
MCF2L-218ENST00000442625 LINC00527Q9UJ94 153 aa10.77□□□□□ -0.69
MCF2L-218ENST00000442625 TRBV7-3A0A075B6L6 115 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 MT-ATP8P03928 68 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 COL6A6A6NMZ7 2263 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 K7ENP7 123 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 ZFAND6Q6FIF0 208 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 KLHL30-AS1Q8NEE0 82 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
MCF2L-218ENST00000442625 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 J3QLI3 93 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 HLA-DRB4P13762 266 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-218ENST00000442625 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 HLA-DRB4X5D2U9 266 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 IGF2RP11717 2491 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 ADORA2A-AS1P86434 159 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 EBI3Q14213 229 aa10.75□□□□□ -0.69
MCF2L-218ENST00000442625 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 C11orf71Q6IPW1 123 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-218ENST00000442625 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-218ENST00000442625 IGKV3-7A0A075B6H7 116 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 LGALS1P09382 135 aaKnown RBP10.74□□□□□ -0.69
MCF2L-218ENST00000442625 SPTAN1Q13813 2472 aaKnown RBP10.74□□□□□ -0.69
MCF2L-218ENST00000442625 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-218ENST00000442625 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
MCF2L-218ENST00000442625 A0A1W2PPR1 153 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 F8VRH5 84 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 SMIM2Q9BVW6 85 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 H7C1H1 209 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 MGPP08493 103 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 FBXL19-AS1Q494R0 122 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 Q6ZUT4 128 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
MCF2L-218ENST00000442625 LOC107984156A0A0G2JMH3 177 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 PLNP26678 52 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 SAA4P35542 130 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 SMCPP49901 116 aaPredicted RBP10.72□□□□□ -0.69
MCF2L-218ENST00000442625 MINOS1Q5TGZ0 78 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 ARL17AQ8IVW1 177 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 RASL10AQ92737 203 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 MINOS1-NBL1R4GNA1 71 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 APOMO95445 188 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 RAXQ9Y2V3 346 aa10.72□□□□□ -0.69
MCF2L-218ENST00000442625 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-218ENST00000442625 SLC25A16P16260 332 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 CRYBG3Q68DQ2 2970 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 RBAKDNA6NC62 111 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 ZNF815PA8K554 130 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 PSMB2P49721 201 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 NFE4Q86UQ8 179 aa10.71□□□□□ -0.69
MCF2L-218ENST00000442625 OOSP1A8MZH6 123 aa10.71□□□□□ -0.7
MCF2L-218ENST00000442625 F6UB75 175 aa10.71□□□□□ -0.7
MCF2L-218ENST00000442625 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.7
MCF2L-218ENST00000442625 C16orf92Q96LL3 132 aa10.71□□□□□ -0.7
MCF2L-218ENST00000442625 METTL26Q96S19 204 aa10.71□□□□□ -0.7
MCF2L-218ENST00000442625 FHL3Q13643 280 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 SUMO2P61956 95 aaKnown RBP10.7□□□□□ -0.7
MCF2L-218ENST00000442625 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
MCF2L-218ENST00000442625 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 C1orf43Q9BWL3 253 aa10.7□□□□□ -0.7
MCF2L-218ENST00000442625 GNRH2O43555 120 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 S100A4P26447 101 aaKnown RBP10.69□□□□□ -0.7
MCF2L-218ENST00000442625 TAL2Q16559 108 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 MEIG1Q5JSS6 88 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 LOC107984640A0A0U1RRK4 108 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 XGP55808 180 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms