RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR13D1Q8NGV5 346 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 HEATR1Q9H583 2144 aaKnown RBP0.93□□□□□ -2.26
VPS41-207ENST00000439468 FBXO5Q9UKT4 447 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 C22orf24Q9Y442 160 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 OR1I1O60431 355 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 TCL1BO95988 128 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 IFNA6P05013 189 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 C8GP07360 202 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 UQCRHP07919 91 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 CASP1P29466 404 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 ZNF93P35789 620 aaPredicted RBP0.92□□□□□ -2.26
VPS41-207ENST00000439468 PLCXD2Q0VAA5 305 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 FADDQ13158 208 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 TRAPPC6BQ86SZ2 158 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 OOSP2Q86WS3 158 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 C12orf29Q8N999 325 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 OR8D4Q8NGM9 314 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 ODF3Q96PU9 254 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 TRABDQ9H4I3 376 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 CBLN4Q9NTU7 201 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 TAS2R4Q9NYW5 299 aa0.92□□□□□ -2.26
VPS41-207ENST00000439468 A0A087X0T9 212 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 CXorf51AA0A1B0GTR3 108 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 GEMIN2O14893 280 aaKnown RBP0.91□□□□□ -2.26
VPS41-207ENST00000439468 LYZL6O75951 148 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 UBL3O95164 117 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 OR4E1P0C645 316 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 KRTAP2-3P0C7H8 128 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 MIFP14174 115 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 PPIBP23284 216 aaKnown RBP0.91□□□□□ -2.26
VPS41-207ENST00000439468 RHOBP62745 196 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 HIST1H3AP68431 136 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 H3F3AP84243 136 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 SPANXN5Q5MJ07 72 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 Q6Q795 121 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 PHF13Q86YI8 300 aaPredicted RBP0.91□□□□□ -2.26
VPS41-207ENST00000439468 OR4S1Q8NGB4 309 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 COX14Q96I36 57 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 OBSCN-AS1Q96MR7 158 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 KRTAP2-4Q9BYR9 128 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 CENPHQ9H3R5 247 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 ENY2Q9NPA8 101 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 UTP11Q9Y3A2 253 aaKnown RBP0.91□□□□□ -2.26
VPS41-207ENST00000439468 KMT2DO14686 5537 aa0.91□□□□□ -2.26
VPS41-207ENST00000439468 TRBV6-8A0A0A6YYG3 113 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 FAM159BA6NKW6 160 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 SULT1B1O43704 296 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 OR2B3O76000 313 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 SMR3BP02814 79 aaPredicted RBP0.9□□□□□ -2.27
VPS41-207ENST00000439468 RAB4BP61018 213 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 YPEL3P61236 119 aaPredicted RBP0.9□□□□□ -2.27
VPS41-207ENST00000439468 TFAMQ00059 246 aaKnown RBP0.9□□□□□ -2.27
VPS41-207ENST00000439468 PDE6HQ13956 83 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 DEFB112Q30KQ8 113 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 LIN52Q52LA3 116 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 BRMS1LQ5PSV4 323 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 TEX29Q8N6K0 151 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 DEFB108BQ8NET1 73 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 HIST1H2BLQ99880 126 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 KIFC1Q9BW19 673 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 EPDR1Q9UM22 224 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 FAM32AQ9Y421 112 aaKnown RBP0.9□□□□□ -2.27
VPS41-207ENST00000439468 SNURFQ9Y675 71 aa0.9□□□□□ -2.27
VPS41-207ENST00000439468 IGKV2D-26A0A0A0MRZ7 120 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 TRBV6-7A0A0A0MS04 114 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 TRAV4A0A0B4J268 109 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 LYNX1G3V0Z9 82 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 CYB5BO43169 146 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 OR7C1O76099 320 aaPredicted RBP0.89□□□□□ -2.27
VPS41-207ENST00000439468 RHOGP84095 191 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 REEP5Q00765 189 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 PLGLB1Q02325 96 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 SPA17Q15506 151 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 TSNQ15631 228 aaKnown RBP0.89□□□□□ -2.27
VPS41-207ENST00000439468 NDUFA11Q86Y39 141 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 OR10J5Q8NHC4 309 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 STAG3L4Q8TBR4 150 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 POP5Q969H6 163 aaKnown RBP0.89□□□□□ -2.27
VPS41-207ENST00000439468 C2orf50Q96LR7 162 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 FAIMQ9NVQ4 179 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 TVP23BQ9NYZ1 205 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 SLC35A3Q9Y2D2 325 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 MUC17Q685J3 4493 aa0.89□□□□□ -2.27
VPS41-207ENST00000439468 NUPR2A6NF83 97 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 SERPINA1P01009 418 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 CST2P09228 141 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 BAALC-AS2P0C853 105 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 HSD11B1P28845 292 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 ERP29P30040 261 aaKnown RBP0.88□□□□□ -2.27
VPS41-207ENST00000439468 RNASE4P34096 147 aaKnown RBP0.88□□□□□ -2.27
VPS41-207ENST00000439468 ATP5G3P48201 142 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 PIGPP57054 158 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 TAF1AQ15573 450 aaPredicted RBP0.88□□□□□ -2.27
VPS41-207ENST00000439468 TAC4Q86UU9 113 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 LINC00301Q8NCQ3 95 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 SFT2D1Q8WV19 159 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 SLAMF6Q96DU3 332 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 C9orf16Q9BUW7 83 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 TMEM133Q9H2Q1 129 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms