RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 ZNF331Q9NQX6 463 aaPredicted RBP9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
CDC42EP1-204ENST00000434728 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 EPM2AB3EWF7 344 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 ZNF253O75346 499 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 HOXA5P20719 270 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 LEPP41159 167 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 ESRGQ1W209 222 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 COX19Q49B96 90 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
CDC42EP1-204ENST00000434728 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.92
CDC42EP1-204ENST00000434728 TRAV12-3A0A0B4J271 114 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 C5orf52A6NGY3 159 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 H3BNG1 76 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 H3BTX0 84 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
CDC42EP1-204ENST00000434728 K7EN84 100 aa9.26□□□□□ -0.93
CDC42EP1-204ENST00000434728 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
CDC42EP1-204ENST00000434728 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
CDC42EP1-204ENST00000434728 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
CDC42EP1-204ENST00000434728 LINC00315P59091 139 aa9.26□□□□□ -0.93
CDC42EP1-204ENST00000434728 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 PGPA6NDG6 321 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 SLC17A3O00476 420 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 TCRAP04437 139 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 ERVFC1-1P60608 527 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 UBE2G1P62253 170 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 Q6ZTI0 123 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 LINC00612Q8N6U2 182 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 ZNF492Q9P255 531 aa9.25□□□□□ -0.93
CDC42EP1-204ENST00000434728 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 PRAC2D3DTV9 90 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 K7EQM0 130 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 PHOX2AO14813 284 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 SIVA1O15304 175 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 S100A8P05109 93 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 DAZ2Q13117 558 aaKnown RBP9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 CT83Q5H943 113 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 BAGE2Q86Y30 109 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 ZFP82Q8N141 532 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 V9GYV3 84 aa9.24□□□□□ -0.93
CDC42EP1-204ENST00000434728 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 LTAP01374 205 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 GSN-AS1Q9NRJ2 163 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
CDC42EP1-204ENST00000434728 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 DNAH5Q8TE73 4624 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 A0A096LPF7 62 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 PAX4O43316 350 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 NXPH4O95158 308 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 MT-ND6P03923 174 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 TRGC2P03986 189 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 FRZBQ92765 325 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
CDC42EP1-204ENST00000434728 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 C7orf71A4D174 169 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 SNRPEP62304 92 aaKnown RBP9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 CDPF1Q6NVV7 123 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 WDR73Q6P4I2 378 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 Q86TA4 180 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 NFE4Q86UQ8 179 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 ZFP30Q9Y2G7 519 aa9.21□□□□□ -0.94
CDC42EP1-204ENST00000434728 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
CDC42EP1-204ENST00000434728 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
CDC42EP1-204ENST00000434728 IGHV3-53P01767 116 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms