RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 RAB19A4D1S5 217 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 NUDT3O95989 172 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 SLAQ13239 276 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 IL36BQ9NZH7 164 aa12.79□□□□□ -0.36
HLA-F-220ENST00000434407 ATP6V1G1O75348 118 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 IGLV2-8P01709 118 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 SFTA3P0C7M3 94 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 ASIPP42127 132 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 PIK3CD-AS1Q5SR53 167 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 PRO0255Q9UI72 69 aa12.78□□□□□ -0.36
HLA-F-220ENST00000434407 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
HLA-F-220ENST00000434407 M0R036 132 aa12.77□□□□□ -0.37
HLA-F-220ENST00000434407 CRYBA4P53673 196 aa12.77□□□□□ -0.37
HLA-F-220ENST00000434407 SMIM12Q96EX1 92 aa12.77□□□□□ -0.37
HLA-F-220ENST00000434407 TRBV20OR9-2A0A075B6H5 130 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 RBFOX3A6NFN3 312 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 S100A4P26447 101 aaKnown RBP12.76□□□□□ -0.37
HLA-F-220ENST00000434407 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
HLA-F-220ENST00000434407 CENPWQ5EE01 88 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 ZNF506Q5JVG8 444 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 OR4C5Q8NGB2 326 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 HHLA3Q9XRX5 114 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 DNAH10Q8IVF4 4471 aa12.76□□□□□ -0.37
HLA-F-220ENST00000434407 A0A096LPF7 62 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 C9JCJ5 164 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 RS1O15537 224 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 PAX4O43316 350 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
HLA-F-220ENST00000434407 CXCL1P09341 107 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 CFAP126Q5VTH2 177 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 UQCC3Q6UW78 93 aa12.75□□□□□ -0.37
HLA-F-220ENST00000434407 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 TMEM250H0YL14 139 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 H3BVH4 76 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 J3QL48 77 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 CIDEAO60543 219 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 ARMS2P0C7Q2 107 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 UBE2DNLQ8IWF7 75 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 FAM210AQ96ND0 272 aa12.74□□□□□ -0.37
HLA-F-220ENST00000434407 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
HLA-F-220ENST00000434407 GATA1P15976 413 aaPredicted RBP12.73□□□□□ -0.37
HLA-F-220ENST00000434407 GNG4P50150 75 aa12.73□□□□□ -0.37
HLA-F-220ENST00000434407 PEA15Q15121 130 aa12.73□□□□□ -0.37
HLA-F-220ENST00000434407 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
HLA-F-220ENST00000434407 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
HLA-F-220ENST00000434407 TMSB15BA0A087X1C1 80 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 C19orf71A6NCJ1 209 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 S100A1P23297 94 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 CCL18P55774 89 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 LCE2CQ5TA81 110 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
HLA-F-220ENST00000434407 RPL19P84098 196 aaKnown RBP12.71□□□□□ -0.37
HLA-F-220ENST00000434407 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.37
HLA-F-220ENST00000434407 ESRGQ1W209 222 aa12.71□□□□□ -0.37
HLA-F-220ENST00000434407 ICOSQ9Y6W8 199 aa12.71□□□□□ -0.37
HLA-F-220ENST00000434407 A8MWV9 139 aa12.7□□□□□ -0.38
HLA-F-220ENST00000434407 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
HLA-F-220ENST00000434407 UFSP1Q6NVU6 142 aa12.7□□□□□ -0.38
HLA-F-220ENST00000434407 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
HLA-F-220ENST00000434407 SSBP4Q9BWG4 385 aaPredicted RBP12.7□□□□□ -0.38
HLA-F-220ENST00000434407 SMDT1Q9H4I9 107 aa12.7□□□□□ -0.38
HLA-F-220ENST00000434407 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
HLA-F-220ENST00000434407 SNAI2O43623 268 aa12.69□□□□□ -0.38
HLA-F-220ENST00000434407 MGST1P10620 155 aaKnown RBP12.69□□□□□ -0.38
HLA-F-220ENST00000434407 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
HLA-F-220ENST00000434407 ZFP2Q6ZN57 461 aa12.69□□□□□ -0.38
HLA-F-220ENST00000434407 PARLQ9H300 379 aa12.69□□□□□ -0.38
HLA-F-220ENST00000434407 BIN3Q9NQY0 253 aa12.69□□□□□ -0.38
HLA-F-220ENST00000434407 K7EQD1 137 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 NXPH4O95158 308 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 Q6ZR54 194 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 SYT8Q8NBV8 401 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 JPT2Q9H910 190 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
HLA-F-220ENST00000434407 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 GYPEP15421 78 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 ZFP82Q8N141 532 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 SLC25A29Q8N8R3 303 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 DAZAP1Q96EP5 407 aaKnown RBP12.67□□□□□ -0.38
HLA-F-220ENST00000434407 SFRP2Q96HF1 295 aa12.67□□□□□ -0.38
HLA-F-220ENST00000434407 MRPS16Q9Y3D3 137 aaKnown RBP12.67□□□□□ -0.38
HLA-F-220ENST00000434407 DNAH17Q9UFH2 4485 aa12.66□□□□□ -0.38
HLA-F-220ENST00000434407 TMEM218A2RU14 115 aa12.66□□□□□ -0.38
HLA-F-220ENST00000434407 K7EN84 100 aa12.66□□□□□ -0.38
HLA-F-220ENST00000434407 SAMD10Q9BYL1 202 aa12.66□□□□□ -0.38
HLA-F-220ENST00000434407 C9JQL5 133 aa12.65□□□□□ -0.38
HLA-F-220ENST00000434407 SRP19P09132 144 aaKnown RBP12.65□□□□□ -0.38
HLA-F-220ENST00000434407 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
HLA-F-220ENST00000434407 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
HLA-F-220ENST00000434407 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
HLA-F-220ENST00000434407 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms