RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MUC22E2RYF6 1773 aaPredicted RBP1.54□□□□□ -2.16
CLK1-204ENST00000432425 SHROOM2Q13796 1616 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 NINQ8N4C6 2090 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 ARHGEF12Q9NZN5 1544 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 GOLGA3Q08378 1498 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 SHANK2Q9UPX8 1470 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 DLG5Q8TDM6 1919 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 PDCD11Q14690 1871 aaKnown RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 MYO16Q9Y6X6 1858 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 SIPA1L3O60292 1781 aaPredicted RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 PEAK1Q9H792 1746 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 IGKV2D-26A0A0A0MRZ7 120 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 TRAV3A0A0B4J244 114 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 LOC107984156A0A0G2JMH3 177 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 TRBV7-7A0A0K0K1E9 115 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 MUC21A0A140T8X8 626 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 C17orf51A8MQB3 221 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 H3BMM0 161 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 H3BUT2 72 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 K7EM74 188 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 BPY2O14599 106 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 YPEL1O60688 119 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 IGLV1-51P01701 117 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 IGHV1-69P01742 117 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 FXYD7P58549 80 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 SEC11AP67812 179 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 MRPS36P82909 103 aaKnown RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 WFDC2Q14508 124 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 ZNF322Q6U7Q0 402 aaPredicted RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 C2orf91Q6ZV80 131 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 C5orf38Q86SI9 138 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 ARL17AQ8IVW1 177 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 Q8IYB0 196 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 C1orf64Q8NEQ6 169 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 SPTSSAQ969W0 71 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 UBE2WQ96B02 151 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 IMMP2LQ96T52 175 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 SLC50A1Q9BRV3 221 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 CHCHD7Q9BUK0 85 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 XAGE1AQ9HD64 81 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 LINC00474Q9P2X8 69 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 AHDC1Q5TGY3 1603 aaPredicted RBP1.53□□□□□ -2.16
CLK1-204ENST00000432425 SETBP1Q9Y6X0 1596 aa1.53□□□□□ -2.16
CLK1-204ENST00000432425 PLIN4Q96Q06 1357 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 A0A087WXM4 84 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 A0A0B4J2C4 111 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 A0A1W2PQD3 144 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 A8MUU9 505 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 E7EQL1 145 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 J3QLW9 94 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 GNRH2O43555 120 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 SH2D1AO60880 128 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 PIRTP0C851 137 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 COL8A2P25067 703 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 LSM3P62310 102 aaKnown RBP1.52□□□□□ -2.17
CLK1-204ENST00000432425 IGFBP7Q16270 282 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.52□□□□□ -2.17
CLK1-204ENST00000432425 ATP11AUNQ6ZP68 121 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 PPDPFLQ8WWR9 84 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 RNF5Q99942 180 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CST11Q9H112 138 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 NDUFB11Q9NX14 153 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CACFD1Q9UGQ2 172 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 LY96Q9Y6Y9 160 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 MGAMO43451 1857 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CPAMD8Q8IZJ3 1885 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CUX1P39880 1505 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 CDK13Q14004 1512 aaKnown RBP1.52□□□□□ -2.17
CLK1-204ENST00000432425 DISP1Q96F81 1524 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 DOCK11Q5JSL3 2073 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 STRCP1A6NGW2 1772 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 RGPD8O14715 1765 aaPredicted RBP1.52□□□□□ -2.17
CLK1-204ENST00000432425 RGPD5Q99666 1765 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 RPRD2Q5VT52 1461 aaKnown RBP1.52□□□□□ -2.17
CLK1-204ENST00000432425 RGPD1P0DJD0 1748 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 ANKARQ7Z5J8 1434 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 MAP3K4Q9Y6R4 1608 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 SLX4Q8IY92 1834 aa1.52□□□□□ -2.17
CLK1-204ENST00000432425 IGKV1OR2-108A0A075B7D4 117 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 IGHV1-24A0A0C4DH33 117 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 C7orf77A4D0Y5 90 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 SYS1-DBNDD2H3BUS1 97 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 C19orf84I3L1E1 186 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ATOX1O00244 68 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 CCKP06307 115 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 SAA1P0DJI8 122 aaPredicted RBP1.51□□□□□ -2.17
CLK1-204ENST00000432425 PTHLHP12272 177 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 ZNF22P17026 224 aaPredicted RBP1.51□□□□□ -2.17
CLK1-204ENST00000432425 HMGN3Q15651 99 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 MIAQ16674 131 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 NMSQ5H8A3 153 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 FAM19A2Q8N3H0 131 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 Q8N814 137 aa1.51□□□□□ -2.17
CLK1-204ENST00000432425 Q8NDZ9 215 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms