RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 IGLV2-18A0A075B6J9 118 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 GNG7O60262 68 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 CCL3L1P16619 93 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 HILS1P60008 231 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 LYZP61626 148 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 DIAPH2-AS1Q14236 149 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 HCP5Q6MZN7 132 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 Q75L30 129 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 FOXC2Q99958 501 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 RASL11BQ9BPW5 248 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 MAP1LC3AQ9H492 121 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 DNHD1Q96M86 4753 aa6.21□□□□□ -1.41
VTI1A-202ENST00000432306 DSCAMO60469 2012 aa6.21□□□□□ -1.41
VTI1A-202ENST00000432306 JMJD1CQ15652 2540 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 DNAJC13O75165 2243 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 K7EIM0 57 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 M0R1B8 84 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 SH2D1AO60880 128 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 DPM2O94777 84 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 IGLV1-47P01700 117 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 CKS2P33552 79 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 XGP55808 180 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 RPL24P83731 157 aaKnown RBP6.21□□□□□ -1.42
VTI1A-202ENST00000432306 TWIST1Q15672 202 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 PPP1R27Q86WC6 154 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
VTI1A-202ENST00000432306 UFC1Q9Y3C8 167 aa6.21□□□□□ -1.42
VTI1A-202ENST00000432306 FLNAP21333 2647 aaKnown RBP6.21□□□□□ -1.42
VTI1A-202ENST00000432306 DOCK7Q96N67 2140 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 TRBV7-3A0A075B6L6 115 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 RBP4P02753 201 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 IGHV1-8P0DP01 117 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 DEFB108BQ8NET1 73 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 IGFBPL1Q8WX77 278 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 TMEM158Q8WZ71 300 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
VTI1A-202ENST00000432306 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 CENPVL3A0A0U1RRI6 287 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 LOC389332A0A1B0GUA5 103 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 TMEM178BH3BS89 294 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 CD164Q04900 197 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 RRN3P1Q2M238 152 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 C12orf74Q32Q52 190 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 LINC01561Q8N1V8 128 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 TTC9CQ8N5M4 171 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 Q8N8P6 123 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 DLX4Q92988 240 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-202ENST00000432306 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 NDUFB3O43676 98 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 ELANEP08246 267 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 EGR2P11161 476 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-202ENST00000432306 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 WFDC2Q14508 124 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 ZC2HC1BQ5TFG8 222 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-202ENST00000432306 SPATA3Q8NHX4 192 aa6.19□□□□□ -1.42
VTI1A-202ENST00000432306 NHP2Q9NX24 153 aaKnown RBP6.19□□□□□ -1.42
VTI1A-202ENST00000432306 TIMM8BQ9Y5J9 83 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-202ENST00000432306 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-202ENST00000432306 PRR14LQ5THK1 2151 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 NSD1Q96L73 2696 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-202ENST00000432306 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 IGHV4-4A0A075B6R2 117 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 A0A087WX48 190 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 IGHV1-3A0A0C4DH29 117 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 RBAKDNA6NC62 111 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 H3BMG7 143 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 C16orf97H3BN30 126 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 K7EMI3 77 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 M0R3E3 92 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 OXTP01178 125 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 KLRD1Q13241 179 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
VTI1A-202ENST00000432306 MRPL16Q9NX20 251 aaKnown RBP6.18□□□□□ -1.42
VTI1A-202ENST00000432306 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.17□□□□□ -1.42
VTI1A-202ENST00000432306 K7ERJ3 54 aa6.17□□□□□ -1.42
VTI1A-202ENST00000432306 RPL7P18124 248 aaKnown RBP6.17□□□□□ -1.42
VTI1A-202ENST00000432306 PLNP26678 52 aa6.17□□□□□ -1.42
VTI1A-202ENST00000432306 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
VTI1A-202ENST00000432306 CTSZQ9UBR2 303 aa6.17□□□□□ -1.42
VTI1A-202ENST00000432306 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
VTI1A-202ENST00000432306 MAP1AP78559 2803 aaPredicted RBP6.17□□□□□ -1.42
VTI1A-202ENST00000432306 LY6LH3BQJ8 138 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 NDUFA3O95167 84 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 IL4P05112 153 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 SLC25A16P16260 332 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 FOXI1Q12951 378 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 KLK9Q2XQG4 91 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 ETDBQ3ZM63 59 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 SBSPONQ8IVN8 264 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 ZNF418Q8TF45 676 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-202ENST00000432306 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 KLK9Q9UKQ9 250 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 FN1P02751 2386 aaKnown RBP6.16□□□□□ -1.42
VTI1A-202ENST00000432306 FABP5P3A8MUU1 101 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms