RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SMKR1H3BMG3 65 aa16.19■□□□□ 0.18
VSX1-205ENST00000429762 EVI2AP22794 236 aa16.19■□□□□ 0.18
VSX1-205ENST00000429762 SCRT2Q9NQ03 307 aa16.19■□□□□ 0.18
VSX1-205ENST00000429762 MUC4Q99102 2169 aa16.19■□□□□ 0.18
VSX1-205ENST00000429762 IGHV3-16A0A0C4DH30 117 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 FABP4P15090 132 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 RPL35AP18077 110 aaKnown RBP16.18■□□□□ 0.18
VSX1-205ENST00000429762 S100A2P29034 98 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 TDRG1Q3Y452 100 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 MRPL51Q4U2R6 128 aaKnown RBP16.18■□□□□ 0.18
VSX1-205ENST00000429762 TMEM191AQ9H0A3 160 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 TRRAPQ9Y4A5 3859 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 NCR2O95944 276 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 CACNG7P62955 275 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 RNF185Q96GF1 192 aa16.18■□□□□ 0.18
VSX1-205ENST00000429762 D6R8Y8 96 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 OR10J3Q5JRS4 329 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 DNLZQ5SXM8 178 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 CBY3A6NI87 242 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 MED14OSP0DP75 135 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 IGLL1P15814 213 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 CMC4P56277 68 aaPredicted RBP16.17■□□□□ 0.18
VSX1-205ENST00000429762 DMRTA1Q5VZB9 504 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 DEFB125Q8N687 156 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 HIST1H2BLQ99880 126 aa16.17■□□□□ 0.18
VSX1-205ENST00000429762 NOTCH3Q9UM47 2321 aa16.16■□□□□ 0.18
VSX1-205ENST00000429762 IGHV4-4A0A075B6R2 117 aa16.16■□□□□ 0.18
VSX1-205ENST00000429762 GAS8-AS1O95177 125 aa16.16■□□□□ 0.18
VSX1-205ENST00000429762 C3orf56Q8N813 242 aa16.16■□□□□ 0.18
VSX1-205ENST00000429762 ZNF747Q9BV97 191 aa16.16■□□□□ 0.18
VSX1-205ENST00000429762 INSP01308 110 aa16.15■□□□□ 0.18
VSX1-205ENST00000429762 AMBPP02760 352 aa16.15■□□□□ 0.18
VSX1-205ENST00000429762 RAB4AP20338 218 aa16.15■□□□□ 0.18
VSX1-205ENST00000429762 CLUHP3Q96NS8 147 aa16.15■□□□□ 0.18
VSX1-205ENST00000429762 INSL3P51460 131 aa16.14■□□□□ 0.17
VSX1-205ENST00000429762 OR10D4PQ8NGN7 298 aa16.14■□□□□ 0.17
VSX1-205ENST00000429762 LINC01587Q99440 93 aa16.14■□□□□ 0.17
VSX1-205ENST00000429762 IGHV3OR16-12A0A075B7B8 117 aa16.13■□□□□ 0.17
VSX1-205ENST00000429762 C9orf85Q96MD7 179 aa16.13■□□□□ 0.17
VSX1-205ENST00000429762 FAM110AQ9BQ89 295 aa16.13■□□□□ 0.17
VSX1-205ENST00000429762 JPT2Q9H910 190 aa16.13■□□□□ 0.17
VSX1-205ENST00000429762 TRAV26-2A0A0B4J265 109 aa16.12■□□□□ 0.17
VSX1-205ENST00000429762 GATA1P15976 413 aaPredicted RBP16.12■□□□□ 0.17
VSX1-205ENST00000429762 RNASEKQ6P5S7 137 aaKnown RBP16.12■□□□□ 0.17
VSX1-205ENST00000429762 C12orf54Q6X4T0 127 aa16.12■□□□□ 0.17
VSX1-205ENST00000429762 C14orf178Q8N769 122 aaPredicted RBP16.12■□□□□ 0.17
VSX1-205ENST00000429762 URB1-AS1Q96HZ7 61 aa16.12■□□□□ 0.17
VSX1-205ENST00000429762 CKS2P33552 79 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 SMIM15Q7Z3B0 74 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 C1orf158Q8N1D5 194 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 PRELID3AQ96N28 172 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 U3KQK5 164 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 TRGV11A0A075B6L2 103 aa16.11■□□□□ 0.17
VSX1-205ENST00000429762 GIG44P09565 113 aaPredicted RBP16.11■□□□□ 0.17
VSX1-205ENST00000429762 PACRGQ96M98 296 aaPredicted RBP16.11■□□□□ 0.17
VSX1-205ENST00000429762 GTSCR1Q86UQ5 136 aa16.1■□□□□ 0.17
VSX1-205ENST00000429762 ORMDL3Q8N138 153 aa16.1■□□□□ 0.17
VSX1-205ENST00000429762 WFDC9Q8NEX5 89 aa16.1■□□□□ 0.17
VSX1-205ENST00000429762 TMEM208Q9BTX3 173 aa16.1■□□□□ 0.17
VSX1-205ENST00000429762 NXPH4O95158 308 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 NPYP01303 97 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 PMCHP20382 165 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 NIT1Q86X76 327 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 LOC389332A0A1B0GUA5 103 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 MGPP08493 103 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 NUTF2P61970 127 aaKnown RBP16.09■□□□□ 0.17
VSX1-205ENST00000429762 FAM19A2Q8N3H0 131 aa16.09■□□□□ 0.17
VSX1-205ENST00000429762 ESDP10768 282 aa16.08■□□□□ 0.16
VSX1-205ENST00000429762 AZU1P20160 251 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 TMEM18Q96B42 140 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 MCRIP2Q9BUT9 160 aaKnown RBP16.07■□□□□ 0.16
VSX1-205ENST00000429762 SAMD10Q9BYL1 202 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 STAB1Q9NY15 2570 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 A0A087WWL8 130 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 AP1S3Q96PC3 154 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 GSN-AS1Q9NRJ2 163 aa16.07■□□□□ 0.16
VSX1-205ENST00000429762 PMCHL1Q16048 86 aa16.06■□□□□ 0.16
VSX1-205ENST00000429762 SHISA2Q6UWI4 295 aa16.06■□□□□ 0.16
VSX1-205ENST00000429762 DPH3P1Q9H4G8 78 aa16.06■□□□□ 0.16
VSX1-205ENST00000429762 C20orf144Q9BQM9 153 aa16.06■□□□□ 0.16
VSX1-205ENST00000429762 AMTP48728 403 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 IFI27P40305 119 aaPredicted RBP16.04■□□□□ 0.16
VSX1-205ENST00000429762 ZNF415Q09FC8 603 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 ZNF876PQ49A33 203 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 C11orf72Q8NBR9 251 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 TMEM158Q8WZ71 300 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 KIF25-AS1Q9Y6Z4 181 aa16.04■□□□□ 0.16
VSX1-205ENST00000429762 HSBP1O75506 76 aa16.03■□□□□ 0.16
VSX1-205ENST00000429762 OXLD1Q5BKU9 147 aa16.03■□□□□ 0.16
VSX1-205ENST00000429762 SYT8Q8NBV8 401 aa16.03■□□□□ 0.16
VSX1-205ENST00000429762 TNFRSF6BO95407 300 aa16.02■□□□□ 0.16
VSX1-205ENST00000429762 FAM74A4Q5TZK3 123 aa16.02■□□□□ 0.16
VSX1-205ENST00000429762 LINC00467Q9BRT7 94 aa16.02■□□□□ 0.16
VSX1-205ENST00000429762 LINC00614P0C842 121 aa16.02■□□□□ 0.15
VSX1-205ENST00000429762 PRSS3P2Q8NHM4 247 aa16.02■□□□□ 0.15
VSX1-205ENST00000429762 SMIM17P0DL12 118 aa16.01■□□□□ 0.15
VSX1-205ENST00000429762 LINC00315P59091 139 aa16.01■□□□□ 0.15
VSX1-205ENST00000429762 LINC00518Q8N0U6 118 aa16.01■□□□□ 0.15
VSX1-205ENST00000429762 NRACQ8N912 160 aa16.01■□□□□ 0.15
VSX1-205ENST00000429762 CMYA5Q8N3K9 4069 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms