RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LOXL1Q08397 574 aaPredicted RBP4.49□□□□□ -1.69
HERC4-206ENST00000427635 C17orf58Q2M2W7 97 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 VOPP1Q96AW1 172 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 SCN5AQ14524 2016 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 TRAV10A0A0B4J240 114 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 TRAV26-2A0A0B4J265 109 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 LINC01548A6NM66 108 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 ZC2HC1BQ5TFG8 222 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 KAAG1Q9UBP8 84 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 KLK12Q9UKR0 248 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 P0DMU3 169 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 FAM231AP0DMU4 169 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 FAM231CP0DMU5 169 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 NREPQ16612 68 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 C20orf78Q9BR46 151 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 PNRC2Q9NPJ4 139 aaKnown RBP4.48□□□□□ -1.69
HERC4-206ENST00000427635 FAM215AQ9Y5M1 114 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 H0YIZ8 118 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 NDUFS7O75251 213 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 LY6G6DO95868 133 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 RBAKDNA6NC62 111 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 C2orf70A6NJV1 201 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 M0R2N4 97 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 IGLV1-44P01699 117 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 Q5BKY6 102 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 ZNF843Q8N446 348 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 DIRC1Q969H9 104 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 SPTBN1Q01082 2364 aaKnown RBP4.48□□□□□ -1.69
HERC4-206ENST00000427635 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 ARID2Q68CP9 1835 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 TRBV20-1A0A075B6N2 111 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 IGLL1P15814 213 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 TMEM14EPQ6UXP3 125 aa4.48□□□□□ -1.69
HERC4-206ENST00000427635 KIAA1671Q9BY89 1806 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-17P01599 117 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 MLANAQ16655 118 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 FOXL2NBQ6ZUU3 175 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 DEFB125Q8N687 156 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 PTPN13Q12923 2485 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 RALGAPA1Q6GYQ0 2036 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 CARHSP1Q9Y2V2 147 aaKnown RBP4.47□□□□□ -1.69
HERC4-206ENST00000427635 FAM104BQ5XKR9 115 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 FAM19A1Q7Z5A9 133 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 AJUBAQ96IF1 538 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 Q9H8V8 135 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 ABCA7Q8IZY2 2146 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 NAV3Q8IVL0 2385 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 GNRH2O43555 120 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 FNDC1Q4ZHG4 1894 aaPredicted RBP4.47□□□□□ -1.69
HERC4-206ENST00000427635 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 PKD1L2Q7Z442 2459 aa4.47□□□□□ -1.69
HERC4-206ENST00000427635 SYS1-DBNDD2H3BUS1 97 aa4.46□□□□□ -1.69
HERC4-206ENST00000427635 MRPL51Q4U2R6 128 aaKnown RBP4.46□□□□□ -1.69
HERC4-206ENST00000427635 HIGD2BQ4VC39 106 aa4.46□□□□□ -1.69
HERC4-206ENST00000427635 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.69
HERC4-206ENST00000427635 PRO0255Q9UI72 69 aa4.46□□□□□ -1.69
HERC4-206ENST00000427635 MYOFQ9NZM1 2061 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 ANK1P16157 1881 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 FGF6P10767 208 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 Q6ZS49 121 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 C5orf56Q8N8D9 126 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 FRMPD3Q5JV73 1810 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 IGHV4-31P0DP07 118 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 UBE2D2P62837 147 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 RNF126Q9BV68 326 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 RP1P56715 2156 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 IGKV1D-8A0A087WSZ0 117 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 TMEM263Q8WUH6 116 aaKnown RBP4.46□□□□□ -1.7
HERC4-206ENST00000427635 LENEPQ9Y5L5 61 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 LINC00205P59089 165 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 CARD19Q96LW7 228 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 CKAP5Q14008 2032 aa4.46□□□□□ -1.7
HERC4-206ENST00000427635 DOCK4Q8N1I0 1966 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 TRBV7-3A0A075B6L6 115 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.45□□□□□ -1.7
HERC4-206ENST00000427635 U3KQA8 63 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 RTTNQ86VV8 2226 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 IGLV2-18A0A075B6J9 118 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 K7EM74 188 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 PLA2G2AP14555 144 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 KIR3DS1Q14943 382 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 K7EMI3 77 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 LINC00322Q6ZN03 302 aaPredicted RBP4.45□□□□□ -1.7
HERC4-206ENST00000427635 MDC1Q14676 2089 aaKnown RBP4.45□□□□□ -1.7
HERC4-206ENST00000427635 K7EMT4 169 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 Q6ZR03 302 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 UPK3BQ9BT76 320 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 CACNA1CQ13936 2221 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 DOCK6Q96HP0 2047 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.45□□□□□ -1.7
HERC4-206ENST00000427635 J3QQQ9 107 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms