RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
HERC3-205ENST00000426683 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
HERC3-205ENST00000426683 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
HERC3-205ENST00000426683 H3BVH4 76 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 PDE6DO43924 150 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 ESRGQ1W209 222 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 MED9Q9NWA0 146 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 MUC4Q99102 2169 aa12.5□□□□□ -0.41
HERC3-205ENST00000426683 RS1O15537 224 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 TAGLN2P37802 199 aaKnown RBP12.49□□□□□ -0.41
HERC3-205ENST00000426683 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 CFAP126Q5VTH2 177 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
HERC3-205ENST00000426683 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
HERC3-205ENST00000426683 RAB19A4D1S5 217 aa12.48□□□□□ -0.41
HERC3-205ENST00000426683 ZNF575Q86XF7 245 aa12.48□□□□□ -0.41
HERC3-205ENST00000426683 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
HERC3-205ENST00000426683 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
HERC3-205ENST00000426683 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
HERC3-205ENST00000426683 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
HERC3-205ENST00000426683 PCNPQ8WW12 178 aaKnown RBP12.47□□□□□ -0.41
HERC3-205ENST00000426683 CIDEAO60543 219 aa12.46□□□□□ -0.41
HERC3-205ENST00000426683 GYPEP15421 78 aa12.46□□□□□ -0.41
HERC3-205ENST00000426683 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
HERC3-205ENST00000426683 RPL19P84098 196 aaKnown RBP12.46□□□□□ -0.41
HERC3-205ENST00000426683 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
HERC3-205ENST00000426683 K7EQD1 137 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
HERC3-205ENST00000426683 GNG4P50150 75 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 Q6ZR54 194 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 SCRT2Q9NQ03 307 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
HERC3-205ENST00000426683 PHLDA3Q9Y5J5 127 aa12.45□□□□□ -0.42
HERC3-205ENST00000426683 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 RBFOX3A6NFN3 312 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 A8MWV9 139 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 SRIP30626 198 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 PARLQ9H300 379 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 Q9H8V8 135 aa12.44□□□□□ -0.42
HERC3-205ENST00000426683 LOC100131303A0A0U1RQF7 123 aa12.43□□□□□ -0.42
HERC3-205ENST00000426683 SLC25A29Q8N8R3 303 aa12.43□□□□□ -0.42
HERC3-205ENST00000426683 SMIM12Q96EX1 92 aa12.43□□□□□ -0.42
HERC3-205ENST00000426683 JPT2Q9H910 190 aa12.43□□□□□ -0.42
HERC3-205ENST00000426683 TRBV20OR9-2A0A075B6H5 130 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 NBDYA0A0U1RRE5 68 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 M0R381 172 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 CXCL1P09341 107 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 MED14OSP0DP75 135 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
HERC3-205ENST00000426683 DAZAP1Q96EP5 407 aaKnown RBP12.42□□□□□ -0.42
HERC3-205ENST00000426683 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 RHOHQ15669 191 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 TOR2AQ5JU69 321 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 SAMD10Q9BYL1 202 aa12.41□□□□□ -0.42
HERC3-205ENST00000426683 DNAH2Q9P225 4427 aa12.4□□□□□ -0.42
HERC3-205ENST00000426683 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 Q6ZSN1 163 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 EIF5A2Q9GZV4 153 aaKnown RBP12.39□□□□□ -0.43
HERC3-205ENST00000426683 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 BIRC6Q9NR09 4857 aa12.39□□□□□ -0.43
HERC3-205ENST00000426683 RHODO00212 210 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 RTL8CO15255 209 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 SNAI2O43623 268 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 NXPH4O95158 308 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 C1orf134Q5TEV5 83 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 SH2D6Q7Z4S9 175 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 OR2D3Q8NGH3 330 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
HERC3-205ENST00000426683 SSBP4Q9BWG4 385 aaPredicted RBP12.38□□□□□ -0.43
HERC3-205ENST00000426683 A0A087WWL8 130 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 P01737 135 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 CEBPGP53567 150 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 RPS20P60866 119 aaKnown RBP12.37□□□□□ -0.43
HERC3-205ENST00000426683 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
HERC3-205ENST00000426683 SIVA1O15304 175 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 CRYGDP07320 174 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
HERC3-205ENST00000426683 GZMBP10144 247 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 376.1 ms