RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MGPP08493 103 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 Q1RN00 199 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 IGF2-ASQ6U949 168 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 SPXQ9BT56 116 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 ANKRD11Q6UB99 2663 aaPredicted RBP8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 ACACAQ13085 2346 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
SEC61A1-202ENST00000424880 IGLV3-9A0A075B6K5 115 aa8.65□□□□□ -1.03
SEC61A1-202ENST00000424880 DUSP14O95147 198 aaKnown RBP8.65□□□□□ -1.03
SEC61A1-202ENST00000424880 IGHG3P01860 377 aa8.65□□□□□ -1.03
SEC61A1-202ENST00000424880 GATA4P43694 442 aa8.65□□□□□ -1.03
SEC61A1-202ENST00000424880 TEX36Q5VZQ5 186 aa8.65□□□□□ -1.03
SEC61A1-202ENST00000424880 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 Q8N1Y9 231 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 C15orf53Q8NAA6 179 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 COL6A6A6NMZ7 2263 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 NRGNQ92686 78 aa8.64□□□□□ -1.03
SEC61A1-202ENST00000424880 ADARB2-AS1A8MUL3 147 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 CRYGBP07316 175 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 NPC2P61916 151 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 C1orf162Q8NEQ5 155 aaPredicted RBP8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 TIMM23O14925 209 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 A0A0J9YY99 117 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 Q6ZSV7 163 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 CEP295Q9C0D2 2601 aa8.63□□□□□ -1.03
SEC61A1-202ENST00000424880 A4D1N5 150 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 FOXC1Q12948 553 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 OR10J6PQ8NGY7 276 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 TRAV17A0A0B4J275 112 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 C5orf47Q569G3 176 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 C10orf126Q8N4M7 172 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 SORL1Q92673 2214 aa8.62□□□□□ -1.03
SEC61A1-202ENST00000424880 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 IGHV7-4-1A0A0J9YVY3 117 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 IGKV3-7A0A075B6H7 116 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 COX6B1P14854 86 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 NDPQ00604 133 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 LY6DQ14210 128 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 ODF3Q96PU9 254 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 BUB1B-PAK6H3BSN5 160 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 DLX6P56179 175 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 ZNF56Q15929 161 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
SEC61A1-202ENST00000424880 C17orf100A8MU93 164 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 IGHV3-30P01768 117 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 CRYGDP07320 174 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 IGHV3-30-5P0DP03 117 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 LINC01587Q99440 93 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 MSRB2Q9Y3D2 182 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 ATP5J2P56134 94 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 PDE6HQ13956 83 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 PRR9Q5T870 116 aa8.6□□□□□ -1.03
SEC61A1-202ENST00000424880 LY6HO94772 140 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 WIPF1O43516 503 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 ADIPOQQ15848 244 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 C21orf62Q9NYP8 219 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 CACNA1AO00555 2505 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 FAM57AQ8TBR7 257 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 JPT2Q9H910 190 aa8.59□□□□□ -1.03
SEC61A1-202ENST00000424880 MFAP4P55083 255 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 TSHBP01222 138 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 CTSGP08311 255 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 RPL13AP40429 203 aaKnown RBP8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 LINC00311Q8N616 119 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 KLK5Q9Y337 293 aaPredicted RBP8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 IGLV1-47P01700 117 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 PRSS2P07478 247 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 IGFL3Q6UXB1 125 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms