RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 CSPG4Q6UVK1 2322 aa13.62□□□□□ -0.23
BRPF1-203ENST00000424362 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 XCL2Q9UBD3 114 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 LINC00322Q6ZN03 302 aaPredicted RBP13.61□□□□□ -0.23
BRPF1-203ENST00000424362 OVOL2Q9BRP0 275 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 TEX48A0A1B0GUV7 120 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 IGLL5B9A064 214 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 SPRY2O43597 315 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 AZU1P20160 251 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 GDF5OSQ5U4N7 250 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 C1orf229Q6ZS94 237 aaPredicted RBP13.61□□□□□ -0.23
BRPF1-203ENST00000424362 MLST8Q9BVC4 326 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
BRPF1-203ENST00000424362 Q8N9W7 124 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 OTOGLQ3ZCN5 2332 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 IGHV3-16A0A0C4DH30 117 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 PRAC2D3DTV9 90 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 TTTY13Q9BZ97 58 aa13.6□□□□□ -0.23
BRPF1-203ENST00000424362 FXYD2P54710 66 aa13.59□□□□□ -0.23
BRPF1-203ENST00000424362 S100A7L2Q5SY68 101 aa13.59□□□□□ -0.23
BRPF1-203ENST00000424362 TP53TG3Q9ULZ0 132 aa13.59□□□□□ -0.23
BRPF1-203ENST00000424362 RPL35AP18077 110 aaKnown RBP13.59□□□□□ -0.23
BRPF1-203ENST00000424362 RHOHQ15669 191 aa13.59□□□□□ -0.23
BRPF1-203ENST00000424362 ATP6V0BQ99437 205 aa13.59□□□□□ -0.23
BRPF1-203ENST00000424362 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
BRPF1-203ENST00000424362 C11orf68Q9H3H3 251 aaKnown RBP13.59□□□□□ -0.23
BRPF1-203ENST00000424362 RPL39LQ96EH5 51 aaKnown RBP13.59□□□□□ -0.23
BRPF1-203ENST00000424362 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.23
BRPF1-203ENST00000424362 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
BRPF1-203ENST00000424362 JPT2Q9H910 190 aa13.58□□□□□ -0.24
BRPF1-203ENST00000424362 FANCD2OSQ96PS1 177 aa13.57□□□□□ -0.24
BRPF1-203ENST00000424362 FOXI2Q6ZQN5 318 aa13.57□□□□□ -0.24
BRPF1-203ENST00000424362 HCFC1P51610 2035 aa13.57□□□□□ -0.24
BRPF1-203ENST00000424362 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
BRPF1-203ENST00000424362 Q8N7P7 452 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 GAGE12JA6NER3 117 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 LINC01619G3V211 115 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 GAGE4Q13068 117 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 GAGE5Q13069 117 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
BRPF1-203ENST00000424362 C16orf54Q6UWD8 224 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 ZNRF2Q8NHG8 242 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 IGHV3-38A0A0C4DH36 116 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 SH2D6Q7Z4S9 175 aa13.56□□□□□ -0.24
BRPF1-203ENST00000424362 RNF223E7ERA6 249 aa13.55□□□□□ -0.24
BRPF1-203ENST00000424362 ELANEP08246 267 aa13.55□□□□□ -0.24
BRPF1-203ENST00000424362 CFC1BP0CG36 223 aa13.55□□□□□ -0.24
BRPF1-203ENST00000424362 CFC1P0CG37 223 aa13.55□□□□□ -0.24
BRPF1-203ENST00000424362 ODF1Q14990 250 aa13.55□□□□□ -0.24
BRPF1-203ENST00000424362 INAFM2P0DMQ5 153 aa13.54□□□□□ -0.24
BRPF1-203ENST00000424362 C9orf47Q6ZRZ4 202 aa13.54□□□□□ -0.24
BRPF1-203ENST00000424362 MAPK1IP1LQ8NDC0 245 aa13.54□□□□□ -0.24
BRPF1-203ENST00000424362 GAGE2AQ6NT46 116 aa13.54□□□□□ -0.24
BRPF1-203ENST00000424362 SPANXA1Q9NS26 97 aa13.54□□□□□ -0.24
BRPF1-203ENST00000424362 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
BRPF1-203ENST00000424362 TRAV12-1A0A0B4J245 112 aa13.53□□□□□ -0.24
BRPF1-203ENST00000424362 VWC2LB2RUY7 222 aa13.52□□□□□ -0.24
BRPF1-203ENST00000424362 NTN5Q8WTR8 489 aaPredicted RBP13.52□□□□□ -0.24
BRPF1-203ENST00000424362 KIAA1549Q9HCM3 1950 aa13.52□□□□□ -0.24
BRPF1-203ENST00000424362 NACAE9PAV3 2078 aa13.52□□□□□ -0.24
BRPF1-203ENST00000424362 HIST1H4AP62805 103 aaKnown RBP13.52□□□□□ -0.25
BRPF1-203ENST00000424362 ZFP2Q6ZN57 461 aa13.52□□□□□ -0.25
BRPF1-203ENST00000424362 DNAJC30Q96LL9 226 aa13.52□□□□□ -0.25
BRPF1-203ENST00000424362 DEFB130BP0DP73 79 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 DEFB130AP0DP74 79 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 SS18Q15532 418 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 C2CD3Q4AC94 2353 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 J3QLI3 93 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 RNASE13Q5GAN3 156 aaKnown RBP13.51□□□□□ -0.25
BRPF1-203ENST00000424362 AJUBAQ96IF1 538 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 WFDC2Q14508 124 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 PRO3102Q9H379 93 aa13.51□□□□□ -0.25
BRPF1-203ENST00000424362 NOTCH2Q04721 2471 aa13.5□□□□□ -0.25
BRPF1-203ENST00000424362 NAV3Q8IVL0 2385 aa13.5□□□□□ -0.25
BRPF1-203ENST00000424362 HERVK_113P63121 156 aa13.5□□□□□ -0.25
BRPF1-203ENST00000424362 C5orf56Q8N8D9 126 aa13.5□□□□□ -0.25
BRPF1-203ENST00000424362 PTPN13Q12923 2485 aa13.5□□□□□ -0.25
BRPF1-203ENST00000424362 CARD19Q96LW7 228 aa13.49□□□□□ -0.25
BRPF1-203ENST00000424362 CENPFP49454 3210 aa13.49□□□□□ -0.25
BRPF1-203ENST00000424362 BLCAPP62952 87 aa13.49□□□□□ -0.25
BRPF1-203ENST00000424362 LAMTOR3Q9UHA4 124 aa13.49□□□□□ -0.25
BRPF1-203ENST00000424362 E9PLD3 99 aa13.48□□□□□ -0.25
BRPF1-203ENST00000424362 ZNF80P51504 273 aaPredicted RBP13.48□□□□□ -0.25
BRPF1-203ENST00000424362 PTPRSQ13332 1948 aa13.48□□□□□ -0.25
BRPF1-203ENST00000424362 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
BRPF1-203ENST00000424362 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
BRPF1-203ENST00000424362 C22orf34Q6ZV56 151 aa13.48□□□□□ -0.25
BRPF1-203ENST00000424362 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 ZFP36P26651 326 aaKnown RBP13.47□□□□□ -0.25
BRPF1-203ENST00000424362 CFHR3Q02985 330 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 TOMM6Q96B49 74 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
BRPF1-203ENST00000424362 PFN2P35080 140 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 MYCNOSP40205 109 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 DEFB112Q30KQ8 113 aa13.47□□□□□ -0.25
BRPF1-203ENST00000424362 GAGE7O76087 117 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms