RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF138P52744 262 aa12.57□□□□□ -0.4
CMTM3-202ENST00000424011 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
CMTM3-202ENST00000424011 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
CMTM3-202ENST00000424011 FLNAP21333 2647 aaKnown RBP12.56□□□□□ -0.4
CMTM3-202ENST00000424011 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 RPL11P62913 178 aaKnown RBP12.56□□□□□ -0.4
CMTM3-202ENST00000424011 KRTAP1-1Q07627 177 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 TM4SF20Q53R12 229 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 AGPAT4-IT1Q9H0P7 198 aa12.56□□□□□ -0.4
CMTM3-202ENST00000424011 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
CMTM3-202ENST00000424011 SPANXB1Q9NS25 103 aaPredicted RBP12.56□□□□□ -0.4
CMTM3-202ENST00000424011 LGALS1P09382 135 aaKnown RBP12.55□□□□□ -0.4
CMTM3-202ENST00000424011 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 OVOL1O14753 267 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 NCR2O95944 276 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
CMTM3-202ENST00000424011 SOCS3O14543 225 aa12.54□□□□□ -0.4
CMTM3-202ENST00000424011 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
CMTM3-202ENST00000424011 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
CMTM3-202ENST00000424011 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
CMTM3-202ENST00000424011 TIMM8BQ9Y5J9 83 aaPredicted RBP12.54□□□□□ -0.4
CMTM3-202ENST00000424011 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
CMTM3-202ENST00000424011 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
CMTM3-202ENST00000424011 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
CMTM3-202ENST00000424011 F8W1H4 67 aa12.53□□□□□ -0.4
CMTM3-202ENST00000424011 ZNF493Q6ZR52 646 aa12.53□□□□□ -0.4
CMTM3-202ENST00000424011 LGALS9O00182 355 aa12.52□□□□□ -0.41
CMTM3-202ENST00000424011 ORM1P02763 201 aa12.52□□□□□ -0.41
CMTM3-202ENST00000424011 SIGLEC8Q9NYZ4 499 aa12.52□□□□□ -0.41
CMTM3-202ENST00000424011 NOTCH2Q04721 2471 aa12.52□□□□□ -0.41
CMTM3-202ENST00000424011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.51□□□□□ -0.41
CMTM3-202ENST00000424011 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 SPAG8Q99932 426 aaPredicted RBP12.51□□□□□ -0.41
CMTM3-202ENST00000424011 MRPL16Q9NX20 251 aaKnown RBP12.51□□□□□ -0.41
CMTM3-202ENST00000424011 TSPAN13O95857 204 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 CSN3P07498 182 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 ID1P41134 155 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 DUX5Q96PT3 197 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
CMTM3-202ENST00000424011 WFDC2Q14508 124 aa12.5□□□□□ -0.41
CMTM3-202ENST00000424011 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
CMTM3-202ENST00000424011 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
CMTM3-202ENST00000424011 ACANP16112 2415 aa12.49□□□□□ -0.41
CMTM3-202ENST00000424011 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
CMTM3-202ENST00000424011 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
CMTM3-202ENST00000424011 AMN1Q8IY45 258 aa12.49□□□□□ -0.41
CMTM3-202ENST00000424011 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
CMTM3-202ENST00000424011 ANK3Q12955 4377 aaKnown RBP12.48□□□□□ -0.41
CMTM3-202ENST00000424011 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 A0A087WW49 117 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 D6R8Y8 96 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 TWIST1Q15672 202 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
CMTM3-202ENST00000424011 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
CMTM3-202ENST00000424011 SYNJ2BPP57105 145 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 C11orf21Q9P2W6 132 aa12.47□□□□□ -0.41
CMTM3-202ENST00000424011 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 OR8A1Q8NGG7 326 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 ZNF418Q8TF45 676 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-202ENST00000424011 U3KQK5 164 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 SONP18583 2426 aaKnown RBP12.46□□□□□ -0.41
CMTM3-202ENST00000424011 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
CMTM3-202ENST00000424011 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 PCP2Q8IVA1 136 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 DCANP1Q8TF63 244 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 PHLDA1Q8WV24 401 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-202ENST00000424011 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 MSRB1Q9NZV6 116 aa12.46□□□□□ -0.41
CMTM3-202ENST00000424011 FXYD2P54710 66 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 Q6ZQT7 251 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 GCSHP23434 173 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 TCTAP57738 103 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 OTOGQ6ZRI0 2925 aa12.45□□□□□ -0.42
CMTM3-202ENST00000424011 NMUP48645 174 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 PRELID3AQ96N28 172 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 TRAV21A0A0B4J279 112 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 E9PLD3 99 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 SRD5A1P18405 259 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 EDN2P20800 178 aa12.44□□□□□ -0.42
CMTM3-202ENST00000424011 IFI27P40305 119 aaPredicted RBP12.44□□□□□ -0.42
CMTM3-202ENST00000424011 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms