RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SMIM12Q96EX1 92 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 TRGV2A0A075B6R0 118 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 ZNF727A8MUV8 499 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 K7EN84 100 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 RNASE3P12724 160 aaKnown RBP6.56□□□□□ -1.36
PDGFC-202ENST00000422544 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
PDGFC-202ENST00000422544 ASIPP42127 132 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 RPL19P84098 196 aaKnown RBP6.56□□□□□ -1.36
PDGFC-202ENST00000422544 LGALS9BQ3B8N2 356 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 DAZAP1Q96EP5 407 aaKnown RBP6.56□□□□□ -1.36
PDGFC-202ENST00000422544 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 SPXQ9BT56 116 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
PDGFC-202ENST00000422544 DNAH2Q9P225 4427 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 IGLL5B9A064 214 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 F5H768 121 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 M0R2P5 195 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 ARMS2P0C7Q2 107 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 RASL10AQ92737 203 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 BIN3Q9NQY0 253 aa6.55□□□□□ -1.36
PDGFC-202ENST00000422544 KLK5Q9Y337 293 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-202ENST00000422544 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 H3BVH4 76 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 P01737 135 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 IGHV3-53P01767 116 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 ATP5G1P05496 136 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 FAM74A3Q4VXF1 159 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 RNASE7Q9H1E1 156 aaKnown RBP6.54□□□□□ -1.36
PDGFC-202ENST00000422544 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
PDGFC-202ENST00000422544 LCE6AA0A183 80 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 GZMBP10144 247 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 HOXA5P20719 270 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 TMEM241Q24JQ0 296 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 SOHLH1Q5JUK2 328 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 C18orf15Q96N68 181 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 LY96Q9Y6Y9 160 aa6.53□□□□□ -1.36
PDGFC-202ENST00000422544 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 SFTA3P0C7M3 94 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 RPS20P60866 119 aaKnown RBP6.52□□□□□ -1.37
PDGFC-202ENST00000422544 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 OR4C5Q8NGB2 326 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 PTH2Q96A98 100 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 ZNF479Q96JC4 524 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
PDGFC-202ENST00000422544 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 MUC21A0A0G2JKD1 596 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 A0A0J9YY99 117 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 MUC21A0A140T8X8 626 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 M0R381 172 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 CXCL1P09341 107 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 ERVFC1-1P60608 527 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 SSTP61278 116 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
PDGFC-202ENST00000422544 FHL2Q14192 279 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 COMMD7Q86VX2 200 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 TPPP3Q9BW30 176 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
PDGFC-202ENST00000422544 NAT8Q9UHE5 227 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
PDGFC-202ENST00000422544 TRAV26-1A0A087WT03 109 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 TRGV4A0A0C4DH28 118 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 RS1O15537 224 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 SNAI2O43623 268 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
PDGFC-202ENST00000422544 IGLC6P0CF74 106 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 ADIRFQ15847 76 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 CFAP126Q5VTH2 177 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 FAM231DQ6ZW35 169 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 FER1L6-AS1Q8NA97 138 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 ISOC2Q96AB3 205 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 FAM210BQ96KR6 192 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-202ENST00000422544 JPT2Q9H910 190 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 MUC4Q99102 2169 aa6.5□□□□□ -1.37
PDGFC-202ENST00000422544 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 OR5AL1P0C617 328 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 UQCC3Q6UW78 93 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 ZFP82Q8N141 532 aa6.49□□□□□ -1.37
PDGFC-202ENST00000422544 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms