RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 ZC2HC1AQ96GY0 325 aa12.36□□□□□ -0.43
UBXN11-208ENST00000421827 TXNDC17Q9BRA2 123 aa12.36□□□□□ -0.43
UBXN11-208ENST00000421827 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
UBXN11-208ENST00000421827 A0A1B0GV50 99 aa12.35□□□□□ -0.43
UBXN11-208ENST00000421827 S100A4P26447 101 aaKnown RBP12.35□□□□□ -0.43
UBXN11-208ENST00000421827 ASIPP42127 132 aa12.35□□□□□ -0.43
UBXN11-208ENST00000421827 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
UBXN11-208ENST00000421827 B4DEV8 164 aa12.34□□□□□ -0.43
UBXN11-208ENST00000421827 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
UBXN11-208ENST00000421827 AKR1C3P42330 323 aa12.34□□□□□ -0.43
UBXN11-208ENST00000421827 CRIP1P50238 77 aa12.34□□□□□ -0.43
UBXN11-208ENST00000421827 SH2D6Q7Z4S9 175 aa12.34□□□□□ -0.43
UBXN11-208ENST00000421827 LTAP01374 205 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 FAM162BQ5T6X4 162 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 NHLRC2Q8NBF2 726 aa12.33□□□□□ -0.44
UBXN11-208ENST00000421827 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 KRBOX1C9JBD0 128 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 SH2D1AO60880 128 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 LINC00315P59091 139 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 LGALSLQ3ZCW2 172 aaPredicted RBP12.32□□□□□ -0.44
UBXN11-208ENST00000421827 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 IL36BQ9NZH7 164 aa12.32□□□□□ -0.44
UBXN11-208ENST00000421827 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 M0R036 132 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 RHOHQ15669 191 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 ZNF674Q2M3X9 581 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 WFDC10BQ8IUB3 73 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
UBXN11-208ENST00000421827 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
UBXN11-208ENST00000421827 A8MWV9 139 aa12.3□□□□□ -0.44
UBXN11-208ENST00000421827 H3BVH4 76 aa12.3□□□□□ -0.44
UBXN11-208ENST00000421827 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
UBXN11-208ENST00000421827 TIRAPP58753 221 aa12.3□□□□□ -0.44
UBXN11-208ENST00000421827 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 GRIFINA4D1Z8 144 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
UBXN11-208ENST00000421827 LINC01559Q495D7 138 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 PARLQ9H300 379 aa12.29□□□□□ -0.44
UBXN11-208ENST00000421827 C16orf90A8MZG2 172 aa12.28□□□□□ -0.44
UBXN11-208ENST00000421827 EIF5AL1Q6IS14 154 aaKnown RBP12.28□□□□□ -0.44
UBXN11-208ENST00000421827 Q6ZNX1 250 aa12.28□□□□□ -0.44
UBXN11-208ENST00000421827 Q6ZRN7 208 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-208ENST00000421827 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 K7EP13 123 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 EVI2AP22794 236 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 RAB5CP51148 216 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 JPT2Q9H910 190 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 RYR1P21817 5038 aa12.27□□□□□ -0.45
UBXN11-208ENST00000421827 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 C1QBP02746 253 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 CCL20P78556 96 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 Q6ZSN1 163 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 BAGE2Q86Y30 109 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 TNFRSF18Q9Y5U5 241 aa12.26□□□□□ -0.45
UBXN11-208ENST00000421827 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 SPATA12Q7Z6I5 190 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 MLST8Q9BVC4 326 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 SCRT2Q9NQ03 307 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 GNG13Q9P2W3 67 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 PHLDA3Q9Y5J5 127 aa12.25□□□□□ -0.45
UBXN11-208ENST00000421827 SULT1A2P50226 295 aa12.24□□□□□ -0.45
UBXN11-208ENST00000421827 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
UBXN11-208ENST00000421827 LRP1BQ9NZR2 4599 aa12.24□□□□□ -0.45
UBXN11-208ENST00000421827 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
UBXN11-208ENST00000421827 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 TEX46H3BTG2 121 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 RHODO00212 210 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 CRYGDP07320 174 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 SLC51BQ86UW2 128 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
UBXN11-208ENST00000421827 GAGE12JA6NER3 117 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 M0R381 172 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 RPL35P42766 123 aaKnown RBP12.22□□□□□ -0.45
UBXN11-208ENST00000421827 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 GAGE1Q13065 139 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 GAGE4Q13068 117 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 GAGE5Q13069 117 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 GAGE13Q4V321 117 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 LELP1Q5T871 98 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 ZFP82Q8N141 532 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 C11orf52Q96A22 123 aa12.22□□□□□ -0.45
UBXN11-208ENST00000421827 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms