RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TEN1Q86WV5 123 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 TMEM190Q8WZ59 177 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 TOMM6Q96B49 74 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 TRBV20-1A0A075B6N2 111 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 RPL39P62891 51 aaKnown RBP12.68□□□□□ -0.38
PKP4-204ENST00000421462 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
PKP4-204ENST00000421462 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 TRAV12-1A0A0B4J245 112 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 C9JAW5 83 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
PKP4-204ENST00000421462 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 GNRH2O43555 120 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 SLC50A1Q9BRV3 221 aa12.68□□□□□ -0.38
PKP4-204ENST00000421462 ATRXP46100 2492 aa12.67□□□□□ -0.38
PKP4-204ENST00000421462 B9A039 149 aa12.67□□□□□ -0.38
PKP4-204ENST00000421462 CRIP2P52943 208 aaPredicted RBP12.67□□□□□ -0.38
PKP4-204ENST00000421462 F5H697 171 aa12.67□□□□□ -0.38
PKP4-204ENST00000421462 F6UB75 175 aa12.67□□□□□ -0.38
PKP4-204ENST00000421462 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
PKP4-204ENST00000421462 OR11H6Q8NGC7 330 aa12.67□□□□□ -0.38
PKP4-204ENST00000421462 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
PKP4-204ENST00000421462 UBE2D1P51668 147 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 Q1RN00 199 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 TEX29Q8N6K0 151 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 ATP6V0E1O15342 81 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
PKP4-204ENST00000421462 CD7P09564 240 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 CFC1P0CG37 223 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 ZFAND6Q6FIF0 208 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 METTL26Q96S19 204 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 JPT2Q9H910 190 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 CLPSL1A2RUU4 121 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 TSPEAR-AS2P59090 65 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
PKP4-204ENST00000421462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■■□□ 18.1
PKP4-204ENST00000421462 A0A0J9YY99 117 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 A0A087WWL8 130 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 IGHV4-39P01824 125 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
PKP4-204ENST00000421462 TRAV2A0A0B4J234 112 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 UBE2D3P61077 147 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 UBE2D2P62837 147 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 IGFL3Q6UXB1 125 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 OPRPNQ99935 248 aaPredicted RBP12.63□□□□□ -0.39
PKP4-204ENST00000421462 CRYGDP07320 174 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 SRD5A1P18405 259 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 HERVK_113P61574 105 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 LYRM7Q5U5X0 104 aa12.63□□□□□ -0.39
PKP4-204ENST00000421462 MUC4Q99102 2169 aa12.62□□□□□ -0.39
PKP4-204ENST00000421462 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
PKP4-204ENST00000421462 SLC25A20O43772 301 aa12.62□□□□□ -0.39
PKP4-204ENST00000421462 COX6B1P14854 86 aa12.62□□□□□ -0.39
PKP4-204ENST00000421462 ASIPP42127 132 aa12.62□□□□□ -0.39
PKP4-204ENST00000421462 ZNF256Q9Y2P7 627 aaPredicted RBP12.62□□□□□ -0.39
PKP4-204ENST00000421462 HRNRQ86YZ3 2850 aaPredicted RBP12.62□□□□□ -0.39
PKP4-204ENST00000421462 C10orf126Q8N4M7 172 aa12.61□□□□□ -0.39
PKP4-204ENST00000421462 PRO1854Q9UHT4 67 aa12.61□□□□□ -0.39
PKP4-204ENST00000421462 Q8N9W7 124 aa12.6□□□□□ -0.39
PKP4-204ENST00000421462 A4D1N5 150 aa12.6□□□□□ -0.39
PKP4-204ENST00000421462 TSHBP01222 138 aa12.6□□□□□ -0.39
PKP4-204ENST00000421462 NTN5Q8WTR8 489 aaPredicted RBP12.6□□□□□ -0.39
PKP4-204ENST00000421462 AJUBAQ96IF1 538 aa12.6□□□□□ -0.39
PKP4-204ENST00000421462 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
PKP4-204ENST00000421462 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 ADARB2-AS1A8MUL3 147 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 LINC01619G3V211 115 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 CRLF1O75462 422 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 LGALS3P17931 250 aaKnown RBP12.59□□□□□ -0.39
PKP4-204ENST00000421462 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 TMEM219Q86XT9 240 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 IGHV3-30P01768 117 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 IGHV3-30-5P0DP03 117 aa12.59□□□□□ -0.39
PKP4-204ENST00000421462 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.39
PKP4-204ENST00000421462 SNCGO76070 127 aa12.58□□□□□ -0.39
PKP4-204ENST00000421462 LY6G5BQ8NDX9 201 aa12.58□□□□□ -0.39
PKP4-204ENST00000421462 OR10J6PQ8NGY7 276 aa12.58□□□□□ -0.39
PKP4-204ENST00000421462 GAGE2BQ13066 116 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 DOPEY2Q9Y3R5 2298 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 ZNF292O60281 2723 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
PKP4-204ENST00000421462 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 TCF15Q12870 199 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 GAGE5Q13069 117 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 GAGE6Q13070 117 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
PKP4-204ENST00000421462 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms