RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CFAP126Q5VTH2 177 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 NEGR1Q7Z3B1 354 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 AKAP14Q86UN6 197 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 C6orf223Q8N319 242 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 hCG_2014768A0A024R1R8 64 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 B4DEV8 164 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 SRIP30626 198 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 ASIPP42127 132 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 LYPD5Q6UWN5 251 aa13.95□□□□□ -0.18
GTF3A-202ENST00000419181 PCNPQ8WW12 178 aaKnown RBP13.95□□□□□ -0.18
GTF3A-202ENST00000419181 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 PKD1P98161 4303 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 A0A1W2PPQ1 181 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 KRBOX1C9JBD0 128 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 CIDEAO60543 219 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 S100A9P06702 114 aaKnown RBP13.94□□□□□ -0.18
GTF3A-202ENST00000419181 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
GTF3A-202ENST00000419181 SULT1A2P50226 295 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 CCL20P78556 96 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 DNLZQ5SXM8 178 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 SLC51BQ86UW2 128 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 IL36BQ9NZH7 164 aa13.94□□□□□ -0.18
GTF3A-202ENST00000419181 M0R036 132 aa13.93□□□□□ -0.18
GTF3A-202ENST00000419181 NXPH4O95158 308 aa13.93□□□□□ -0.18
GTF3A-202ENST00000419181 PIK3CD-AS1Q5SR53 167 aa13.93□□□□□ -0.18
GTF3A-202ENST00000419181 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
GTF3A-202ENST00000419181 LOC100131303A0A0U1RQF7 123 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 LINC01559Q495D7 138 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 NHLRC2Q8NBF2 726 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 TXNDC17Q9BRA2 123 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 GNG13Q9P2W3 67 aa13.92□□□□□ -0.18
GTF3A-202ENST00000419181 H3BVH4 76 aa13.91□□□□□ -0.18
GTF3A-202ENST00000419181 SIVA1O15304 175 aa13.91□□□□□ -0.18
GTF3A-202ENST00000419181 C9orf62Q8N4C0 152 aa13.91□□□□□ -0.18
GTF3A-202ENST00000419181 SLC25A29Q8N8R3 303 aa13.91□□□□□ -0.18
GTF3A-202ENST00000419181 MLST8Q9BVC4 326 aa13.91□□□□□ -0.18
GTF3A-202ENST00000419181 TRBV6-4A0A1B0GX49 114 aa13.9□□□□□ -0.18
GTF3A-202ENST00000419181 IGHV3-73A0A0B4J1V6 119 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 GRIFINA4D1Z8 144 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 A8MWV9 139 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 TEX46H3BTG2 121 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 ARMS2P0C7Q2 107 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 TNP2Q05952 138 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 RHOHQ15669 191 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 SH2D6Q7Z4S9 175 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 BAGE2Q86Y30 109 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 C11orf52Q96A22 123 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 PARLQ9H300 379 aa13.89□□□□□ -0.19
GTF3A-202ENST00000419181 MGST1P10620 155 aaKnown RBP13.88□□□□□ -0.19
GTF3A-202ENST00000419181 BTF3P20290 206 aaKnown RBP13.88□□□□□ -0.19
GTF3A-202ENST00000419181 ZFP2Q6ZN57 461 aa13.88□□□□□ -0.19
GTF3A-202ENST00000419181 PRADC1Q9BSG0 188 aa13.88□□□□□ -0.19
GTF3A-202ENST00000419181 SCRT2Q9NQ03 307 aa13.88□□□□□ -0.19
GTF3A-202ENST00000419181 TMSB15BA0A087X1C1 80 aa13.87□□□□□ -0.19
GTF3A-202ENST00000419181 RPL35P42766 123 aaKnown RBP13.87□□□□□ -0.19
GTF3A-202ENST00000419181 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
GTF3A-202ENST00000419181 DERL1Q9BUN8 251 aa13.87□□□□□ -0.19
GTF3A-202ENST00000419181 TIRAPP58753 221 aa13.86□□□□□ -0.19
GTF3A-202ENST00000419181 UFSP1Q6NVU6 142 aa13.86□□□□□ -0.19
GTF3A-202ENST00000419181 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
GTF3A-202ENST00000419181 JPT2Q9H910 190 aa13.86□□□□□ -0.19
GTF3A-202ENST00000419181 Q6ZSN1 163 aa13.85□□□□□ -0.19
GTF3A-202ENST00000419181 WFDC10BQ8IUB3 73 aa13.85□□□□□ -0.19
GTF3A-202ENST00000419181 PHLDA3Q9Y5J5 127 aa13.85□□□□□ -0.19
GTF3A-202ENST00000419181 DNAH11Q96DT5 4516 aa13.85□□□□□ -0.19
GTF3A-202ENST00000419181 LINC00315P59091 139 aa13.84□□□□□ -0.19
GTF3A-202ENST00000419181 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-202ENST00000419181 SAMD10Q9BYL1 202 aa13.84□□□□□ -0.19
GTF3A-202ENST00000419181 IFNA1P01562 189 aa13.83□□□□□ -0.2
GTF3A-202ENST00000419181 CXCL1P09341 107 aa13.83□□□□□ -0.2
GTF3A-202ENST00000419181 RPL19P84098 196 aaKnown RBP13.83□□□□□ -0.2
GTF3A-202ENST00000419181 LY96Q9Y6Y9 160 aa13.83□□□□□ -0.2
GTF3A-202ENST00000419181 KIAA1109Q2LD37 5005 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 RHODO00212 210 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 PDE6DO43924 150 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 DNAH10OSP0CZ25 163 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 MED14OSP0DP75 135 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 BCL2P10415 239 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 PRR27Q6MZM9 219 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 ZFP82Q8N141 532 aa13.82□□□□□ -0.2
GTF3A-202ENST00000419181 DYNC1H1Q14204 4646 aaKnown RBP13.81□□□□□ -0.2
GTF3A-202ENST00000419181 A0A1B0GVG6 124 aa13.81□□□□□ -0.2
GTF3A-202ENST00000419181 M0R381 172 aa13.81□□□□□ -0.2
GTF3A-202ENST00000419181 CENPWQ5EE01 88 aa13.81□□□□□ -0.2
GTF3A-202ENST00000419181 SFRP2Q96HF1 295 aa13.81□□□□□ -0.2
GTF3A-202ENST00000419181 HERC2O95714 4834 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 K7EP13 123 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 IGLV2-8P01709 118 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 LINC00694P0DN24 101 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 ALKAL2Q6UX46 152 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 Q6ZRN7 208 aaPredicted RBP13.8□□□□□ -0.2
GTF3A-202ENST00000419181 VAX2Q9UIW0 290 aa13.8□□□□□ -0.2
GTF3A-202ENST00000419181 TRAV9-2A0A087WT02 112 aa13.79□□□□□ -0.2
GTF3A-202ENST00000419181 CRYGDP07320 174 aa13.79□□□□□ -0.2
GTF3A-202ENST00000419181 FAM74A4Q5TZK3 123 aa13.79□□□□□ -0.2
GTF3A-202ENST00000419181 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
GTF3A-202ENST00000419181 A0A087WWL8 130 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 SNAI2O43623 268 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms