RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ASIPP42127 132 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 CRIP1P50238 77 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 LINC00315P59091 139 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 TMUB2Q71RG4 321 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 ZC2HC1AQ96GY0 325 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 PFDN1O60925 122 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 PIK3CD-AS1Q5SR53 167 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 PKHD1P08F94 4074 aa11.23□□□□□ -0.61
LINC00404-201ENST00000418660 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 B4DEV8 164 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 SH2D1AO60880 128 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 LTAP01374 205 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
LINC00404-201ENST00000418660 AKR1C3P42330 323 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 TIRAPP58753 221 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 RHOHQ15669 191 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 FAM162BQ5T6X4 162 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 IL36BQ9NZH7 164 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
LINC00404-201ENST00000418660 HERC2O95714 4834 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 A0A1B0GV50 99 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 A8MWV9 139 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 C16orf90A8MZG2 172 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 K7EP13 123 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
LINC00404-201ENST00000418660 LGALSLQ3ZCW2 172 aaPredicted RBP11.21□□□□□ -0.61
LINC00404-201ENST00000418660 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
LINC00404-201ENST00000418660 WFDC10BQ8IUB3 73 aa11.21□□□□□ -0.61
LINC00404-201ENST00000418660 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.62
LINC00404-201ENST00000418660 M0R036 132 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 S100A9P06702 114 aaKnown RBP11.2□□□□□ -0.62
LINC00404-201ENST00000418660 DNAH10OSP0CZ25 163 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 EVI2AP22794 236 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 ZNF674Q2M3X9 581 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 PARLQ9H300 379 aa11.2□□□□□ -0.62
LINC00404-201ENST00000418660 H3BVH4 76 aa11.19□□□□□ -0.62
LINC00404-201ENST00000418660 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
LINC00404-201ENST00000418660 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
LINC00404-201ENST00000418660 NFE4Q86UQ8 179 aa11.19□□□□□ -0.62
LINC00404-201ENST00000418660 KIAA1109Q2LD37 5005 aa11.19□□□□□ -0.62
LINC00404-201ENST00000418660 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
LINC00404-201ENST00000418660 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
LINC00404-201ENST00000418660 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
LINC00404-201ENST00000418660 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
LINC00404-201ENST00000418660 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
LINC00404-201ENST00000418660 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
LINC00404-201ENST00000418660 EIF5AL1Q6IS14 154 aaKnown RBP11.17□□□□□ -0.62
LINC00404-201ENST00000418660 Q6ZSN1 163 aa11.17□□□□□ -0.62
LINC00404-201ENST00000418660 TCTE3Q8IZS6 198 aa11.17□□□□□ -0.62
LINC00404-201ENST00000418660 TMSB15BA0A087X1C1 80 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 RAB5CP51148 216 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 JPT2Q9H910 190 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 SCRT2Q9NQ03 307 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 MSRB1Q9NZV6 116 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
LINC00404-201ENST00000418660 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 IGHV3-38A0A0C4DH36 116 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 CRYGDP07320 174 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 MANBALQ9NQG1 85 aa11.15□□□□□ -0.62
LINC00404-201ENST00000418660 RHODO00212 210 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 CCL20P78556 96 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 LELP1Q5T871 98 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 Q6ZNX1 250 aa11.14□□□□□ -0.63
LINC00404-201ENST00000418660 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 EREGO14944 169 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 SULT1A2P50226 295 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 ERVFC1-1P60608 527 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 LINC01556Q5JQF7 62 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 GNG13Q9P2W3 67 aa11.13□□□□□ -0.63
LINC00404-201ENST00000418660 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 M0R381 172 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 C1QBP02746 253 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 CXCL1P09341 107 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 GAGE1Q13065 139 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 GAGE4Q13068 117 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 GAGE5Q13069 117 aa11.12□□□□□ -0.63
LINC00404-201ENST00000418660 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms