RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TRBV7-1A0A0A6YYK4 115 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 A0A1B0GU33 70 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 C7orf77A4D0Y5 90 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 F2Z2F3 143 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 PSCAO43653 123 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 Q6ZR54 194 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 SH2D6Q7Z4S9 175 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 Q8NAQ8 132 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 LINC01600Q96MT4 127 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 DOCK1Q14185 1865 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 ZNF646O15015 1829 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 USP54Q70EL1 1684 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 KDM6BO15054 1643 aa2.02□□□□□ -2.09
CTDSPL-203ENST00000416688 URB2Q14146 1524 aaKnown RBP2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 ZFC3H1O60293 1989 aaKnown RBP2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 THADAQ6YHU6 1953 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 COL2A1P02458 1487 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 COL3A1P02461 1466 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 CDK12Q9NYV4 1490 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 COL24A1Q17RW2 1714 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 IGKV2D-30A0A075B6S6 120 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 TRAV10A0A0B4J240 114 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 B4DSR2 109 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 UMAD1C9J7I0 102 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 PLXNB1O43157 2135 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 ASAH2BP0C7U1 165 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 SMIM13P0DJ93 91 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 SMIM5Q71RC9 77 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 LINC00643Q86TS7 51 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 SPTSSBQ8NFR3 76 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 C20orf166-AS1Q96NR2 134 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 HIGD2AQ9BW72 106 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 CDC42SE1Q9NRR8 79 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 PRO1854Q9UHT4 67 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 PRO0461Q9UI25 63 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 MINOS1-NBL1R4GNA1 71 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 ANKRD12Q6UB98 2062 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 TRPM6Q9BX84 2022 aa2.01□□□□□ -2.09
CTDSPL-203ENST00000416688 RGPD3A6NKT7 1758 aaPredicted RBP2□□□□□ -2.09
CTDSPL-203ENST00000416688 KIDINS220Q9ULH0 1771 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 KNDC1Q76NI1 1749 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 ABCA9Q8IUA7 1624 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 TRAV23DV6A0A075B6W5 121 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 HCG22E2RYF7 251 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 SIX6O95475 246 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 COX6CP09669 75 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 MIR22HGQ0VDD5 57 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 KLKP1Q107X0 134 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 TMEM170BQ5T4T1 132 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 CFAP126Q5VTH2 177 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 DYNLRB1Q9NP97 96 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 MANBALQ9NQG1 85 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 LINC00474Q9P2X8 69 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 ZNF407Q9C0G0 2248 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 TIAM1Q13009 1591 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 PLXNA3P51805 1871 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 STRCQ7RTU9 1775 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 CCDC88CQ9P219 2028 aa2□□□□□ -2.09
CTDSPL-203ENST00000416688 TNS1Q9HBL0 1735 aaKnown RBP2□□□□□ -2.09
CTDSPL-203ENST00000416688 CLTCQ00610 1675 aaKnown RBP1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 PPRC1Q5VV67 1664 aaKnown RBP1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 MYO9BQ13459 2157 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 COL16A1Q07092 1604 aaPredicted RBP1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 PLXNA4Q9HCM2 1894 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 MYO10Q9HD67 2058 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 A0A0J9YX75 114 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 C16orf90A8MZG2 172 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 H7BZZ5 65 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 SFTA3P0C7M3 94 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 HOXB6P17509 224 aaKnown RBP1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 ERHP84090 104 aaKnown RBP1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 ELOBQ15370 118 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 KRTAP15-1Q3LI76 137 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 LIMD2Q9BT23 127 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 MEGF6O75095 1541 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 CABIN1Q9Y6J0 2220 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 PLA2R1Q13018 1463 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 SHANK2Q9UPX8 1470 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 MYH4Q9Y623 1939 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 IQGAP3Q86VI3 1631 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 MYO3AQ8NEV4 1616 aa1.99□□□□□ -2.09
CTDSPL-203ENST00000416688 LTBP1Q14766 1721 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 TCHHQ07283 1943 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 PTPRSQ13332 1948 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 IGHV3OR16-8A0A075B7F1 116 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 TRAV12-1A0A0B4J245 112 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 A0A0G2JND7 137 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 ODF3BA8MYP8 253 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 UBE2D3P61077 147 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 UBE2D2P62837 147 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 GTF3C1Q12789 2109 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 ZNF818PQ6ZRF7 136 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 ZCCHC23Q6ZST2 131 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 VMO1Q7Z5L0 202 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 LYPD6Q86Y78 171 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 C4orf3Q8WVX3 66 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 TVP23CQ96ET8 276 aa1.98□□□□□ -2.09
CTDSPL-203ENST00000416688 ODF3Q96PU9 254 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms