RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 FA2HQ7L5A8 372 aa14.33□□□□□ -0.12
LMO2-203ENST00000411482 C20orf144Q9BQM9 153 aa14.33□□□□□ -0.12
LMO2-203ENST00000411482 C7orf71A4D174 169 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 H3BVH4 76 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 NPYP01303 97 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 AMTNQ6UX39 209 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 C12orf54Q6X4T0 127 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 SMIM15Q7Z3B0 74 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 ANK2Q01484 3957 aa14.32□□□□□ -0.12
LMO2-203ENST00000411482 J3KRW8 73 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 LEPROTL1O95214 131 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 RNASE3P12724 160 aaKnown RBP14.31□□□□□ -0.12
LMO2-203ENST00000411482 EVI2AP22794 236 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 TSPOP30536 169 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 IFI27P40305 119 aaPredicted RBP14.31□□□□□ -0.12
LMO2-203ENST00000411482 SPANXN1Q5VSR9 72 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 RAX2Q96IS3 184 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 PMCHL1Q16048 86 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 DEFB114Q30KQ6 69 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 ZNF747Q9BV97 191 aa14.31□□□□□ -0.12
LMO2-203ENST00000411482 SMKR1H3BMG3 65 aa14.3□□□□□ -0.12
LMO2-203ENST00000411482 A0A096LNJ9 63 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 TRAV25A0A0B4J276 109 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 GNRH2O43555 120 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 CD28P10747 220 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 KHDC1LQ5JSQ8 128 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 TMEM61Q8N0U2 210 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 DUX3Q96PT4 197 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 HSPB8Q9UJY1 196 aa14.29□□□□□ -0.12
LMO2-203ENST00000411482 TSSC4Q9Y5U2 329 aaPredicted RBP14.29□□□□□ -0.12
LMO2-203ENST00000411482 SORL1Q92673 2214 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 S100A4P26447 101 aaKnown RBP14.28□□□□□ -0.12
LMO2-203ENST00000411482 CDKN1BP46527 198 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 CTAG1AP78358 180 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 SPATA12Q7Z6I5 190 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 POM121L12Q8N7R1 296 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 C3orf56Q8N813 242 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 MRAP2Q96G30 205 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 VAMP8Q9BV40 100 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 MAP1LC3AQ9H492 121 aa14.28□□□□□ -0.12
LMO2-203ENST00000411482 SYS1-DBNDD2H3BUS1 97 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 GAS8-AS1O95177 125 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 NCR2O95944 276 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 PET117Q6UWS5 81 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 LINC00173Q6ZV60 143 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 NRACQ8N912 160 aa14.27□□□□□ -0.12
LMO2-203ENST00000411482 NXT2Q9NPJ8 142 aaKnown RBP14.27□□□□□ -0.12
LMO2-203ENST00000411482 CCL24O00175 119 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 HLA-DRB4P13762 266 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 OR2K2Q8NGT1 345 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 CITED1Q99966 193 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 PHLDA3Q9Y5J5 127 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 HLA-DRB4X5D2U9 266 aa14.26□□□□□ -0.13
LMO2-203ENST00000411482 IGLV2-18A0A075B6J9 118 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 TRAV12-3A0A0B4J271 114 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 LOC389332A0A1B0GUA5 103 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 CLUHP3Q96NS8 147 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 SPAG8Q99932 426 aaPredicted RBP14.25□□□□□ -0.13
LMO2-203ENST00000411482 WNK1Q9H4A3 2382 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 H3BMM0 161 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 C9orf85Q96MD7 179 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 CITED2Q99967 270 aaPredicted RBP14.25□□□□□ -0.13
LMO2-203ENST00000411482 DPH3P1Q9H4G8 78 aa14.25□□□□□ -0.13
LMO2-203ENST00000411482 DEFB131AP59861 70 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 DEFA6Q01524 100 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 HIST2H2BDQ6DRA6 164 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 Q8N8P6 123 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 DYNLRB2Q8TF09 96 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 C14orf144Q96I85 54 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 MAP1LC3CQ9BXW4 147 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 ZNF256Q9Y2P7 627 aaPredicted RBP14.24□□□□□ -0.13
LMO2-203ENST00000411482 KIF25-AS1Q9Y6Z4 181 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 TRRAPQ9Y4A5 3859 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 AGRNO00468 2067 aa14.24□□□□□ -0.13
LMO2-203ENST00000411482 IGHV3-16A0A0C4DH30 117 aa14.23□□□□□ -0.13
LMO2-203ENST00000411482 C20orf202A1L168 122 aa14.23□□□□□ -0.13
LMO2-203ENST00000411482 OR4C46A6NHA9 309 aa14.23□□□□□ -0.13
LMO2-203ENST00000411482 GATA1P15976 413 aaPredicted RBP14.23□□□□□ -0.13
LMO2-203ENST00000411482 SHISA2Q6UWI4 295 aa14.23□□□□□ -0.13
LMO2-203ENST00000411482 MUC4Q99102 2169 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 IGHV1OR15-1A0A075B7D0 117 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 M0R381 172 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 HBDP02042 147 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 LINC00315P59091 139 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 CD300EQ496F6 205 aaPredicted RBP14.22□□□□□ -0.13
LMO2-203ENST00000411482 MAP6D1Q9H9H5 199 aa14.22□□□□□ -0.13
LMO2-203ENST00000411482 TRAV9-2A0A087WT02 112 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 LINC01545Q5VT33 79 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 AP1S3Q96PC3 154 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 MIEN1Q9BRT3 115 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 PAM16Q9Y3D7 125 aa14.21□□□□□ -0.13
LMO2-203ENST00000411482 TIMM8BQ9Y5J9 83 aaPredicted RBP14.21□□□□□ -0.13
LMO2-203ENST00000411482 KNCNA6PVL3 124 aa14.2□□□□□ -0.14
LMO2-203ENST00000411482 IGKV3-20P01619 116 aa14.2□□□□□ -0.14
LMO2-203ENST00000411482 CD7P09564 240 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms