RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 IFNA7P01567 189 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
CBX3-203ENST00000409747 S100A4P26447 101 aaKnown RBP9.93□□□□□ -0.82
CBX3-203ENST00000409747 FUSP35637 526 aaKnown RBP eCLIP9.93□□□□□ -0.82
CBX3-203ENST00000409747 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 LELP1Q5T871 98 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 RPL7L1Q6DKI1 246 aaKnown RBP9.93□□□□□ -0.82
CBX3-203ENST00000409747 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 PGPEP1LA6NFU8 196 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 A8MWV9 139 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 Q5BKY6 102 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 ASIPP42127 132 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 AKR1C8PQ5T2L2 129 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 ZFP2Q6ZN57 461 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 HIST1H2BAQ96A08 127 aa9.92□□□□□ -0.82
CBX3-203ENST00000409747 PEX7O00628 323 aa9.91□□□□□ -0.82
CBX3-203ENST00000409747 GCSHP23434 173 aa9.91□□□□□ -0.82
CBX3-203ENST00000409747 OR2T35Q8NGX2 323 aa9.91□□□□□ -0.82
CBX3-203ENST00000409747 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
CBX3-203ENST00000409747 TRAV34A0A0B4J273 112 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 UBE2G2P60604 165 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 LAGE3Q14657 143 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 ZNF726P1Q15940 193 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 Q86TA4 180 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 PARLQ9H300 379 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
CBX3-203ENST00000409747 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.83
CBX3-203ENST00000409747 XGP55808 180 aa9.9□□□□□ -0.83
CBX3-203ENST00000409747 KRTAP10-1P60331 282 aa9.9□□□□□ -0.83
CBX3-203ENST00000409747 LGALSLQ3ZCW2 172 aaPredicted RBP9.9□□□□□ -0.83
CBX3-203ENST00000409747 FRZBQ92765 325 aa9.9□□□□□ -0.83
CBX3-203ENST00000409747 IGLV5-52A0A0A0MRZ9 124 aa9.89□□□□□ -0.83
CBX3-203ENST00000409747 FAM74A7A6NL05 159 aa9.89□□□□□ -0.83
CBX3-203ENST00000409747 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
CBX3-203ENST00000409747 Q9HAA7 133 aa9.89□□□□□ -0.83
CBX3-203ENST00000409747 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 B4DEV8 164 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 RHODO00212 210 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 TCEAL7Q9BRU2 100 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 TM2D2Q9BX73 214 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 ZFP30Q9Y2G7 519 aa9.88□□□□□ -0.83
CBX3-203ENST00000409747 A0A087WWC5 75 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 FGF8P55075 233 aaPredicted RBP9.87□□□□□ -0.83
CBX3-203ENST00000409747 UBE2G1P62253 170 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 DNLZQ5SXM8 178 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 GAGE12JA6NER3 117 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 GAGE1Q13065 139 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 GAGE4Q13068 117 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 GAGE5Q13069 117 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 GAGE13Q4V321 117 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 FAM162BQ5T6X4 162 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 Q8N814 137 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
CBX3-203ENST00000409747 H3BVH4 76 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 ARPC5O15511 151 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 TOR2AQ5JU69 321 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 Q5VSD8 79 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 OR11H4Q8NGC9 324 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 TMEM70Q9BUB7 260 aa9.86□□□□□ -0.83
CBX3-203ENST00000409747 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 KRBOX1C9JBD0 128 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 FHITP49789 147 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 UFSP1Q6NVU6 142 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 Q6ZSN1 163 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 TRBV6-1A0A0K0K1D8 114 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 M0R036 132 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 SH2D1AO60880 128 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 PHLDA3Q9Y5J5 127 aa9.85□□□□□ -0.83
CBX3-203ENST00000409747 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
CBX3-203ENST00000409747 TPT1P13693 172 aaKnown RBP9.84□□□□□ -0.83
CBX3-203ENST00000409747 CRIP1P50238 77 aa9.84□□□□□ -0.83
CBX3-203ENST00000409747 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
CBX3-203ENST00000409747 FAT1Q14517 4588 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 G3V3Q6 166 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 SEC11BP0C7V7 166 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 CST9LP1Q5W188 147 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 SAMD10Q9BYL1 202 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 JPT2Q9H910 190 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms