RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 FREM3P0C091 2139 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 TRAV8-2A0A0B4J237 113 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 NFE4Q86UQ8 179 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 CXCL1P09341 107 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 COL6A6A6NMZ7 2263 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 ZC2HC1BQ5TFG8 222 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 WIPF3A6NGB9 483 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 SYS1-DBNDD2H3BUS1 97 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 NCOR1O75376 2440 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 TRAV13-2A0A0B4J235 113 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 NUPR2A6NF83 97 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 NPYP01303 97 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 HIST2H2BDQ6DRA6 164 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 A8MWP6 167 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 M0R2N4 97 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 P0DMU3 169 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 FAM231AP0DMU4 169 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 FAM231CP0DMU5 169 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
SCN3A-203ENST00000409101 MUC22E2RYF6 1773 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-203ENST00000409101 PRAC2D3DTV9 90 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 LYPD6Q86Y78 171 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 V9GYV3 84 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 GPR179Q6PRD1 2367 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HERV-K104P63124 156 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 STPG4Q8N801 248 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 CACNA1GO43497 2377 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 LY6LH3BQJ8 138 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 K7EMI3 77 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BKO60814 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BJP06899 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 MED14OSP0DP75 135 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BOP23527 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BBP33778 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BDP58876 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BCP62807 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST2H2BEQ16778 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BHQ93079 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 BBC3Q96PG8 261 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-203ENST00000409101 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BNQ99877 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BMQ99879 126 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 IGHV4-28A0A0C4DH34 117 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 GAGE12HA6NDE8 117 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 C10orf99Q6UWK7 81 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 C7orf33Q8WU49 177 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 YLPM1P49750 1951 aaKnown RBP3.81□□□□□ -1.8
SCN3A-203ENST00000409101 ACACAQ13085 2346 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 EBI3Q14213 229 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 OXLD1Q5BKU9 147 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 C2orf82Q6UX34 121 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 BOD1L2Q8IYS8 172 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
SCN3A-203ENST00000409101 SAMD5Q5TGI4 173 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF664Q8N3J9 261 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 C11orf52Q96A22 123 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 IGLV2-18A0A075B6J9 118 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ASPHD1Q5U4P2 390 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 PATE2Q6UY27 113 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 U3KQK5 164 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 E7EUB6 86 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 PSMB8P28062 276 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 DEFB1P60022 68 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 C16orf95Q9H693 158 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 NDUFS5O43920 106 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 CXCL5P42830 114 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF295-AS1Q8N0V1 137 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 RPL39LQ96EH5 51 aaKnown RBP3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF747Q9BV97 191 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 NCKAP5O14513 1909 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 COL5A1P20908 1838 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-203ENST00000409101 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
SCN3A-203ENST00000409101 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 KIR2DL5BA0A0G2JN68 375 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 KIR2DL5BA0A0G2JPC4 375 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 KIR2DL5AQ8N109 375 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 KIR2DL5BQ8NHK3 375 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 DSCR8Q96T75 97 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 GTSF1LQ9H1H1 148 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 Q9H8V8 135 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 FAM186AA6NE01 2351 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 INTS1Q8N201 2190 aaKnown RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 A0A0J9YWU9 116 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 SIVA1O15304 175 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 FGF6P10767 208 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms