RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 FSHBP01225 129 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 LGALS1P09382 135 aaKnown RBP12.6□□□□□ -0.39
NUP50-203ENST00000407019 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 ODF3Q96PU9 254 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 SNRPD3P62318 126 aaKnown RBP12.6□□□□□ -0.39
NUP50-203ENST00000407019 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
NUP50-203ENST00000407019 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
NUP50-203ENST00000407019 ELANEP08246 267 aa12.59□□□□□ -0.39
NUP50-203ENST00000407019 Q6YL49 198 aa12.59□□□□□ -0.39
NUP50-203ENST00000407019 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 K7EQG2 157 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 IGHV4-31P0DP07 118 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 HLA-DRB4P13762 266 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 PLNP26678 52 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 SYNJ2BPP57105 145 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 ZNF702PQ9H963 129 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.39
NUP50-203ENST00000407019 FLNCQ14315 2725 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 LGALS9O00182 355 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 CD7P09564 240 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 HIGD1BQ9P298 99 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
NUP50-203ENST00000407019 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 A0A087WW49 117 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 A0A0J9YX75 114 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 H3BRM9 83 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
NUP50-203ENST00000407019 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 H7C1H1 209 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 LINC00315P59091 139 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 TTTY13Q9BZ97 58 aa12.57□□□□□ -0.4
NUP50-203ENST00000407019 CELSR2Q9HCU4 2923 aa12.56□□□□□ -0.4
NUP50-203ENST00000407019 F8VRH5 84 aa12.56□□□□□ -0.4
NUP50-203ENST00000407019 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
NUP50-203ENST00000407019 C2orf66Q6UXQ4 117 aa12.55□□□□□ -0.4
NUP50-203ENST00000407019 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
NUP50-203ENST00000407019 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
NUP50-203ENST00000407019 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
NUP50-203ENST00000407019 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
NUP50-203ENST00000407019 CHAC1Q9BUX1 264 aa12.55□□□□□ -0.4
NUP50-203ENST00000407019 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
NUP50-203ENST00000407019 RPL32P62910 135 aaKnown RBP12.54□□□□□ -0.4
NUP50-203ENST00000407019 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
NUP50-203ENST00000407019 JPT2Q9H910 190 aa12.54□□□□□ -0.4
NUP50-203ENST00000407019 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
NUP50-203ENST00000407019 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
NUP50-203ENST00000407019 TRAV12-2A0A075B6T6 113 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 K7EP13 123 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
NUP50-203ENST00000407019 SUMO4Q6EEV6 95 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 DUX5Q96PT3 197 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 CDKN1BP46527 198 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 KRTAP10-9P60411 292 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 CSPG4Q6UVK1 2322 aa12.53□□□□□ -0.4
NUP50-203ENST00000407019 A0A087WWL8 130 aa12.52□□□□□ -0.4
NUP50-203ENST00000407019 DEFB113Q30KQ7 82 aa12.52□□□□□ -0.4
NUP50-203ENST00000407019 Q5PR19 223 aa12.52□□□□□ -0.4
NUP50-203ENST00000407019 MUC4Q99102 2169 aa12.52□□□□□ -0.41
NUP50-203ENST00000407019 GCSHP23434 173 aa12.52□□□□□ -0.41
NUP50-203ENST00000407019 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.41
NUP50-203ENST00000407019 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
NUP50-203ENST00000407019 ACACBO00763 2458 aa12.51□□□□□ -0.41
NUP50-203ENST00000407019 F5H697 171 aa12.51□□□□□ -0.41
NUP50-203ENST00000407019 SPINK13Q1W4C9 94 aa12.51□□□□□ -0.41
NUP50-203ENST00000407019 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
NUP50-203ENST00000407019 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
NUP50-203ENST00000407019 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 Q8N1Y9 231 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 FBN2P35556 2912 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 H3BUT2 72 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
NUP50-203ENST00000407019 MAPKAPK5-AS1Q8N8E1 139 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 MDFICQ9P1T7 246 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
NUP50-203ENST00000407019 UTP20O75691 2785 aaKnown RBP12.5□□□□□ -0.41
NUP50-203ENST00000407019 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 RAB37Q96AX2 223 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 LINC01549A6NIU2 74 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 VCYO14598 125 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 FXYD2P54710 66 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 FAM74A4Q5TZK3 123 aa12.49□□□□□ -0.41
NUP50-203ENST00000407019 RNASE8Q8TDE3 154 aaKnown RBP12.49□□□□□ -0.41
NUP50-203ENST00000407019 CR1P17927 2039 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 Q8N2B8 174 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms