RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RAB19A4D1S5 217 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 LINC00862A6NCI5 91 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR7C2O60412 319 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 PRB2P02812 416 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 NBEAP1P0C6P0 100 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 ARL14EPLP0DKL9 152 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGLC2P0DOY2 106 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 HIST1H1EP10412 219 aaKnown RBP3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 CBLN1P23435 193 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 GCHFRP30047 84 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 GALR1P47211 349 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SYNJ2BPP57105 145 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 PDE6HQ13956 83 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 NDUFA5Q16718 116 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 GUK1Q16774 197 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 DEFB136Q30KP8 78 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SPATA31B1PQ5VZV4 182 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 LCN15Q6UWW0 184 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 ZFP2Q6ZN57 461 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 MIR17HGQ75NE6 70 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SSX7Q7RTT5 188 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR8I2Q8N0Y5 310 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 LYPD1Q8N2G4 141 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 EIF4E3Q8N5X7 224 aaKnown RBP3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR9G4Q8NGQ1 327 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 C20orf24Q9BUV8 137 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 RHPN1-AS1Q9BWJ2 59 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SCRT1Q9BWW7 348 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 SLC25A2Q9BXI2 301 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR51M1Q9H341 326 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 MANBALQ9NQG1 85 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 DOK5Q9P104 306 aa3.06□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRAV2A0A0B4J234 112 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRAV25A0A0B4J276 109 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 PLAC8L1A1L4L8 177 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 C2orf70A6NJV1 201 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 OVOL1O14753 267 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 PPP1R2P9O14990 202 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 SNAI2O43623 268 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 IFNA1P01562 189 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 BCL2P10415 239 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 INSL3P51460 131 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 UBE2L3P68036 154 aaKnown RBP3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 KRTAP21-3Q3LHN1 58 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 C12orf54Q6X4T0 127 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 C3orf56Q8N813 242 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 WFDC9Q8NEX5 89 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 FXYD5Q96DB9 178 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 FAM210AQ96ND0 272 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 TCEAL7Q9BRU2 100 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 SLC50A1Q9BRV3 221 aa3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 FBN1P35555 2871 aaKnown RBP3.05□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRRAPQ9Y4A5 3859 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRBV19A0A075B6N1 114 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGHV3OR16-8A0A075B7F1 116 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 TRAV5A0A0B4J249 113 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 RBFOX3A6NFN3 312 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 TMEM250H0YL14 139 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 H3BQ15 152 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 HMGB3O15347 200 aaKnown RBP3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 ZNF207O43670 478 aaKnown RBP3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR10J4P0C629 311 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 PYYP10082 97 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 CDKN1BP46527 198 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 CCL20P78556 96 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 PSG9Q00887 426 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 MEF2BQ02080 365 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 PEA15Q15121 130 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 DEFB114Q30KQ6 69 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 COA6Q5JTJ3 125 aaKnown RBP3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 TCF24Q7RTU0 167 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 OR2K2Q8NGT1 345 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 RXFP4Q8TDU9 374 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 OTORQ9NRC9 128 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 ZNF586Q9NXT0 402 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 VAX2Q9UIW0 290 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 PRELID1Q9Y255 219 aa3.04□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGHV3-49A0A0A0MS15 119 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGHV3-74A0A0B4J1X5 117 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 F6UZH7 168 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 ISLRO14498 428 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 PDE6DO43924 150 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 EIF3GO75821 320 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 IGLV1-51P01701 117 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 RANP62826 216 aaKnown RBP3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 PAFAH1B2P68402 229 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 LINC01551Q86U37 167 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 COMMD7Q86VX2 200 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 IQCF2Q8IXL9 164 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 C5orf17Q8NAS9 161 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 DYNLRB2Q8TF09 96 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 DCANP1Q8TF63 244 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 HIST1H2BAQ96A08 127 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 GPR61Q9BZJ8 451 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 EIF5A2Q9GZV4 153 aaKnown RBP3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 GNG13Q9P2W3 67 aa3.03□□□□□ -1.92
HMGB3P19-201ENST00000403971 CSDC2Q9Y534 153 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms