RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
PTPRA-205ENST00000399903 SHISA2Q6UWI4 295 aa13.12□□□□□ -0.31
PTPRA-205ENST00000399903 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
PTPRA-205ENST00000399903 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
PTPRA-205ENST00000399903 S100A4P26447 101 aaKnown RBP13.12□□□□□ -0.31
PTPRA-205ENST00000399903 POLQO75417 2590 aa13.12□□□□□ -0.31
PTPRA-205ENST00000399903 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 ZNF575Q86XF7 245 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.11□□□□□ -0.319e-12■■■■■ 45
PTPRA-205ENST00000399903 KLRB1Q12918 225 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 TMEM170BQ5T4T1 132 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 C14orf178Q8N769 122 aaPredicted RBP13.11□□□□□ -0.31
PTPRA-205ENST00000399903 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 CCDC179H3BU77 68 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 DLX6P56179 175 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 NRACQ8N912 160 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 RAB1BQ9H0U4 201 aa13.11□□□□□ -0.31
PTPRA-205ENST00000399903 IGHV3-64A0A075B6Q5 118 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 IGHV4-39P01824 125 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 LYRM7Q5U5X0 104 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 SMIM2Q9BVW6 85 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
PTPRA-205ENST00000399903 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
PTPRA-205ENST00000399903 TRAV4A0A0B4J268 109 aa13.09□□□□□ -0.31
PTPRA-205ENST00000399903 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
PTPRA-205ENST00000399903 CRIP2P52943 208 aaPredicted RBP13.09□□□□□ -0.31
PTPRA-205ENST00000399903 IGHG4P01861 327 aa13.09□□□□□ -0.31
PTPRA-205ENST00000399903 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
PTPRA-205ENST00000399903 Q6ZS46 218 aa13.08□□□□□ -0.31
PTPRA-205ENST00000399903 NBR2O15453 112 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 SLC25A20O43772 301 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 LINC01559Q495D7 138 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 NDUFA11Q86Y39 141 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 CELSR2Q9HCU4 2923 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 CRLF1O75462 422 aa13.08□□□□□ -0.32
PTPRA-205ENST00000399903 IGKV3-7A0A075B6H7 116 aa13.07□□□□□ -0.32
PTPRA-205ENST00000399903 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
PTPRA-205ENST00000399903 BAALCQ8WXS3 180 aa13.07□□□□□ -0.32
PTPRA-205ENST00000399903 IGLV1-47P01700 117 aa13.07□□□□□ -0.32
PTPRA-205ENST00000399903 RASL10AQ92737 203 aa13.07□□□□□ -0.32
PTPRA-205ENST00000399903 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
PTPRA-205ENST00000399903 SUMO2P61956 95 aaKnown RBP13.06□□□□□ -0.32
PTPRA-205ENST00000399903 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
PTPRA-205ENST00000399903 IGSF10Q6WRI0 2623 aa13.06□□□□□ -0.32
PTPRA-205ENST00000399903 DEFB1P60022 68 aa13.06□□□□□ -0.32
PTPRA-205ENST00000399903 ECSCRQ19T08 205 aa13.06□□□□□ -0.32
PTPRA-205ENST00000399903 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
PTPRA-205ENST00000399903 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 TRBV7-9A0A0J9YWB2 115 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 TMEM262E9PQX1 116 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE7O76087 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE12FP0CL80 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE12GP0CL81 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE12IP0CL82 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 NDPQ00604 133 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 GAGE4Q13068 117 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 ORMDL2Q53FV1 153 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 KAAG1Q9UBP8 84 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 IGF1P05019 195 aa13.05□□□□□ -0.32
PTPRA-205ENST00000399903 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 CFC1BP0CG36 223 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 CFC1P0CG37 223 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 UBE2D1P51668 147 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 NDUFV3P56181 108 aaKnown RBP13.04□□□□□ -0.32
PTPRA-205ENST00000399903 CNFNQ9BYD5 112 aa13.04□□□□□ -0.32
PTPRA-205ENST00000399903 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 CTSGP08311 255 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 UBE2D3P61077 147 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 HERVK_113P61574 105 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 UBE2D2P62837 147 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 UBTD1Q9HAC8 227 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 CD7P09564 240 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 NHLRC4P0CG21 123 aaPredicted RBP13.03□□□□□ -0.32
PTPRA-205ENST00000399903 FAM159AQ6UWV7 190 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 C8orf31Q8N9H6 132 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
PTPRA-205ENST00000399903 F8W735 103 aaPredicted RBP13.02□□□□□ -0.32
PTPRA-205ENST00000399903 CLEC3BP05452 202 aa13.02□□□□□ -0.32
PTPRA-205ENST00000399903 UCNP55089 124 aa13.02□□□□□ -0.32
PTPRA-205ENST00000399903 IGHV7-4-1A0A0J9YVY3 117 aa13.02□□□□□ -0.33
PTPRA-205ENST00000399903 TRAV12-1A0A0B4J245 112 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 F5H697 171 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 IFITM1P13164 125 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 RPL39P62891 51 aaKnown RBP13.01□□□□□ -0.33
PTPRA-205ENST00000399903 C10orf126Q8N4M7 172 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 A0A0J9YY99 117 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 TEX49A0A1B0GTD5 131 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 RPL11P62913 178 aaKnown RBP13.01□□□□□ -0.33
PTPRA-205ENST00000399903 TOMM6Q96B49 74 aa13.01□□□□□ -0.33
PTPRA-205ENST00000399903 CLEC19AQ6UXS0 136 aa13□□□□□ -0.33
PTPRA-205ENST00000399903 TP53TG1Q9Y2A0 90 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms