RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF688P0C7X2 276 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SMIM17P0DL12 118 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 GATA1P15976 413 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 CDKN1BP46527 198 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 DEFB1P60022 68 aa13.23□□□□□ -0.29
HLA-DQB1-204ENST00000399084 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SYT8Q8NBV8 401 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 USP9YO00507 2555 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 PRSS1P07477 247 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 EDN2P20800 178 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 STPG4Q8N801 248 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 OR9G4Q8NGQ1 327 aa13.22□□□□□ -0.29
HLA-DQB1-204ENST00000399084 A8MTW9 85 aa13.21□□□□□ -0.3
HLA-DQB1-204ENST00000399084 SCGB2A2Q13296 93 aa13.21□□□□□ -0.3
HLA-DQB1-204ENST00000399084 RASL10AQ92737 203 aa13.21□□□□□ -0.3
HLA-DQB1-204ENST00000399084 MCRIP2Q9BUT9 160 aaKnown RBP13.21□□□□□ -0.3
HLA-DQB1-204ENST00000399084 KIF25-AS1Q9Y6Z4 181 aa13.21□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CD7P09564 240 aa13.2□□□□□ -0.3
HLA-DQB1-204ENST00000399084 ODF1Q14990 250 aa13.2□□□□□ -0.3
HLA-DQB1-204ENST00000399084 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
HLA-DQB1-204ENST00000399084 PTPN13Q12923 2485 aa13.2□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRAV26-2A0A0B4J265 109 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRAV12-3A0A0B4J271 114 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TFPI2P48307 235 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 UTP20O75691 2785 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 IGHV1OR15-1A0A075B7D0 117 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRAV12-1A0A0B4J245 112 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 NUDT3O95989 172 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 FXYD7P58549 80 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 ORAOV1Q8WV07 137 aa13.19□□□□□ -0.3
HLA-DQB1-204ENST00000399084 FBN2P35556 2912 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 DPM2O94777 84 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 IGKCP01834 107 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 HLA-DRB4P13762 266 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TOMM6Q96B49 74 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 HLA-DRB4X5D2U9 266 aa13.18□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
HLA-DQB1-204ENST00000399084 LINC00315P59091 139 aa13.17□□□□□ -0.3
HLA-DQB1-204ENST00000399084 OR11H1Q8NG94 326 aa13.17□□□□□ -0.3
HLA-DQB1-204ENST00000399084 MGPP08493 103 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 PLNP26678 52 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 ANKRD39Q53RE8 183 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 PIK3CD-AS1Q5SR53 167 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 AMTNQ6UX39 209 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TMEM208Q9BTX3 173 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CRYBG3Q68DQ2 2970 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 A0A087WX48 190 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 FGF6P10767 208 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CLUHP3Q96NS8 147 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 FOXC2Q99958 501 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 DKK2Q9UBU2 259 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 HHLA3Q9XRX5 114 aa13.16□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CELSR1Q9NYQ6 3014 aa13.15□□□□□ -0.3
HLA-DQB1-204ENST00000399084 VCYO14598 125 aa13.15□□□□□ -0.3
HLA-DQB1-204ENST00000399084 BVES-AS1Q5T3Y7 98 aa13.15□□□□□ -0.3
HLA-DQB1-204ENST00000399084 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
HLA-DQB1-204ENST00000399084 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
HLA-DQB1-204ENST00000399084 CREBBPQ92793 2442 aa13.14□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SLURP1P55000 103 aa13.14□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SEC11AP67812 179 aa13.14□□□□□ -0.31
HLA-DQB1-204ENST00000399084 Q6ZSV7 163 aa13.14□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SVEP1Q4LDE5 3571 aa13.14□□□□□ -0.31
HLA-DQB1-204ENST00000399084 PTH2Q96A98 100 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SCGB3A1Q96QR1 104 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 COX11Q9Y6N1 276 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 H7C1H1 209 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 POLR2KP53803 58 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 C2orf91Q6ZV80 131 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 ERASQ7Z444 233 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 Q8N1Y9 231 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DNAJC9-AS1A6NH13 148 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 H3BMM0 161 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SPINK13Q1W4C9 94 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DYNLRB2Q8TF09 96 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
HLA-DQB1-204ENST00000399084 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
HLA-DQB1-204ENST00000399084 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-204ENST00000399084 EDA2RQ9HAV5 297 aa13.11□□□□□ -0.31
HLA-DQB1-204ENST00000399084 TRBV27A0A0K0K1C4 114 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms