RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 FHITP49789 147 aa12.35□□□□□ -0.43
FXN-203ENST00000396366 PPT1P50897 306 aa12.35□□□□□ -0.43
FXN-203ENST00000396366 Q86TA4 180 aa12.35□□□□□ -0.43
FXN-203ENST00000396366 PTH2Q96A98 100 aa12.35□□□□□ -0.43
FXN-203ENST00000396366 A0A087WTM6 91 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 FABP5P3A8MUU1 101 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 ERVFC1-1P60608 527 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 SH2D6Q7Z4S9 175 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 ZC2HC1AQ96GY0 325 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 MAP1LC3BQ9GZQ8 125 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 JPT2Q9H910 190 aa12.34□□□□□ -0.43
FXN-203ENST00000396366 TIRAPP58753 221 aa12.33□□□□□ -0.44
FXN-203ENST00000396366 RHOHQ15669 191 aa12.33□□□□□ -0.44
FXN-203ENST00000396366 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
FXN-203ENST00000396366 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
FXN-203ENST00000396366 Q9UF83 564 aa12.33□□□□□ -0.44
FXN-203ENST00000396366 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 EREGO14944 169 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 CIDEAO60543 219 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
FXN-203ENST00000396366 Q8N1X5 172 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 HIST1H2BAQ96A08 127 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 PARLQ9H300 379 aa12.32□□□□□ -0.44
FXN-203ENST00000396366 GRIFINA4D1Z8 144 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 B4DEV8 164 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 KRBOX1C9JBD0 128 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 K7EP13 123 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 M0R036 132 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 ASIPP42127 132 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 LGALSLQ3ZCW2 172 aaPredicted RBP12.31□□□□□ -0.44
FXN-203ENST00000396366 OR10J3Q5JRS4 329 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 OR11H4Q8NGC9 324 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 NKX6-2Q9C056 277 aaPredicted RBP12.31□□□□□ -0.44
FXN-203ENST00000396366 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
FXN-203ENST00000396366 H3BVH4 76 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 SH2D1AO60880 128 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
FXN-203ENST00000396366 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 CST9LP1Q5W188 147 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
FXN-203ENST00000396366 TRAV8-6A0A0B4J262 113 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GAGE1Q13065 139 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GAGE4Q13068 117 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GAGE5Q13069 117 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 LINC01556Q5JQF7 62 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 C10orf126Q8N4M7 172 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 IL36BQ9NZH7 164 aa12.29□□□□□ -0.44
FXN-203ENST00000396366 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 A0A1B0GV50 99 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 A8MWV9 139 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 PAGE4O60829 102 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 ARMS2P0C7Q2 107 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 LELP1Q5T871 98 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 Q8N3U1 123 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
FXN-203ENST00000396366 FMC1Q96HJ9 113 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 ZFP30Q9Y2G7 519 aa12.28□□□□□ -0.44
FXN-203ENST00000396366 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 UBE2G1P62253 170 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 DNLZQ5SXM8 178 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 FAM162BQ5T6X4 162 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 STOML3Q8TAV4 291 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 Q9HAA7 133 aa12.27□□□□□ -0.45
FXN-203ENST00000396366 LTAP01374 205 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 ZNF674Q2M3X9 581 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 PIK3CD-AS1Q5SR53 167 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 FAM213BQ8TBF2 198 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 SFT2D1Q8WV19 159 aa12.26□□□□□ -0.45
FXN-203ENST00000396366 FAT1Q14517 4588 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 TRBV6-1A0A0K0K1D8 114 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 LRCOL1A6NCL2 159 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 LINC00694P0DN24 101 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 XGP55808 180 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 ZNF345Q14585 488 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
FXN-203ENST00000396366 A0A087WWL8 130 aa12.24□□□□□ -0.45
FXN-203ENST00000396366 HMSDA8MTL9 139 aa12.24□□□□□ -0.45
FXN-203ENST00000396366 PSCAO43653 123 aa12.24□□□□□ -0.45
FXN-203ENST00000396366 SEC11BP0C7V7 166 aa12.24□□□□□ -0.45
FXN-203ENST00000396366 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
FXN-203ENST00000396366 AKR1C3P42330 323 aa12.23□□□□□ -0.45
FXN-203ENST00000396366 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
FXN-203ENST00000396366 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
FXN-203ENST00000396366 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms