RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 PGPEP1LA6NFU8 196 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 H3BVH4 76 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 RS1O15537 224 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 CIDEAO60543 219 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
UPK3A-202ENST00000396082 GATA1P15976 413 aaPredicted RBP12.03□□□□□ -0.48
UPK3A-202ENST00000396082 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 AKAP14Q86UN6 197 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
UPK3A-202ENST00000396082 CRIP1P50238 77 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 COX8CQ7Z4L0 72 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 PTH2Q96A98 100 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
UPK3A-202ENST00000396082 DNAH2Q9P225 4427 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 LOC100131303A0A0U1RQF7 123 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 RHOHQ15669 191 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
UPK3A-202ENST00000396082 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 A8MWV9 139 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 SULT1A2P50226 295 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 TNP2Q05952 138 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 ZNF674Q2M3X9 581 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 SYT8Q8NBV8 401 aa12□□□□□ -0.49
UPK3A-202ENST00000396082 ARMS2P0C7Q2 107 aa11.99□□□□□ -0.49
UPK3A-202ENST00000396082 LINC01559Q495D7 138 aa11.99□□□□□ -0.49
UPK3A-202ENST00000396082 BAGE2Q86Y30 109 aa11.99□□□□□ -0.49
UPK3A-202ENST00000396082 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
UPK3A-202ENST00000396082 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
UPK3A-202ENST00000396082 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
UPK3A-202ENST00000396082 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
UPK3A-202ENST00000396082 CCL20P78556 96 aa11.98□□□□□ -0.49
UPK3A-202ENST00000396082 PARLQ9H300 379 aa11.98□□□□□ -0.49
UPK3A-202ENST00000396082 PHLDA3Q9Y5J5 127 aa11.98□□□□□ -0.49
UPK3A-202ENST00000396082 HECTD4Q9Y4D8 3996 aa11.97□□□□□ -0.49
UPK3A-202ENST00000396082 IFNA1P01562 189 aa11.97□□□□□ -0.49
UPK3A-202ENST00000396082 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
UPK3A-202ENST00000396082 DNLZQ5SXM8 178 aa11.97□□□□□ -0.49
UPK3A-202ENST00000396082 LY96Q9Y6Y9 160 aa11.97□□□□□ -0.49
UPK3A-202ENST00000396082 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.49
UPK3A-202ENST00000396082 LINC00315P59091 139 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 PRR27Q6MZM9 219 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 WFDC10BQ8IUB3 73 aa11.96□□□□□ -0.49
UPK3A-202ENST00000396082 M0R381 172 aa11.95□□□□□ -0.5
UPK3A-202ENST00000396082 EVI2AP22794 236 aa11.95□□□□□ -0.5
UPK3A-202ENST00000396082 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
UPK3A-202ENST00000396082 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
UPK3A-202ENST00000396082 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
UPK3A-202ENST00000396082 RHODO00212 210 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 JPT2Q9H910 190 aa11.94□□□□□ -0.5
UPK3A-202ENST00000396082 TIRAPP58753 221 aa11.93□□□□□ -0.5
UPK3A-202ENST00000396082 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
UPK3A-202ENST00000396082 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
UPK3A-202ENST00000396082 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
UPK3A-202ENST00000396082 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
UPK3A-202ENST00000396082 TRAV8-6A0A0B4J262 113 aa11.92□□□□□ -0.5
UPK3A-202ENST00000396082 CENPWQ5EE01 88 aa11.92□□□□□ -0.5
UPK3A-202ENST00000396082 OR10J3Q5JRS4 329 aa11.92□□□□□ -0.5
UPK3A-202ENST00000396082 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
UPK3A-202ENST00000396082 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
UPK3A-202ENST00000396082 A0A087WWL8 130 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 PDE6DO43924 150 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 DNAH10OSP0CZ25 163 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 BCL2P10415 239 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 GAGE1Q13065 139 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 GAGE4Q13068 117 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 GAGE5Q13069 117 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 Q6ZSN1 163 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
UPK3A-202ENST00000396082 K7EP13 123 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 CRYGDP07320 174 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 CXCL1P09341 107 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 GNG4P50150 75 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 GTSF1LQ9H1H1 148 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
UPK3A-202ENST00000396082 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 C16orf90A8MZG2 172 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms