RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HAMPP81172 84 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 MORN5Q5VZ52 161 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 NDUFS7O75251 213 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 KRTAP27-1Q3LI81 207 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 FAM120AOSQ5T036 256 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 NPYP01303 97 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 IGHV4-59P01825 116 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 GPR179Q6PRD1 2367 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 SORL1Q92673 2214 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 COL4A4P53420 1690 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-204ENST00000395898 ACYP1P07311 99 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 C11orf53Q8IXP5 236 aa4.28□□□□□ -1.72
VPS13C-204ENST00000395898 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.73
VPS13C-204ENST00000395898 XCL1P47992 114 aa4.28□□□□□ -1.73
VPS13C-204ENST00000395898 MRPL23Q16540 153 aaKnown RBP4.28□□□□□ -1.73
VPS13C-204ENST00000395898 IGLV11-55A0A075B6I3 123 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 Q6ZSR3 168 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 WISP1O95388 367 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 CTSZQ9UBR2 303 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 K7EN84 100 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 NXPH4O95158 308 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 UBE2BP63146 152 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 LRP4O75096 1905 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 GNRH2O43555 120 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 C1orf43Q9BWL3 253 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 ORMDL1Q9P0S3 153 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 H3BMG7 143 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 C5orf56Q8N8D9 126 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 CCL18P55774 89 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 ANKRD29Q8N6D5 301 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 RAI1Q7Z5J4 1906 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-204ENST00000395898 TRBV7-3A0A075B6L6 115 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 IL15RAQ13261 267 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-204ENST00000395898 C17orf77Q96MU5 243 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 IGHV7-81A0A0B4J1V7 117 aa4.27□□□□□ -1.73
VPS13C-204ENST00000395898 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
VPS13C-204ENST00000395898 K7EQD1 137 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 C16orf54Q6UWD8 224 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 CARD19Q96LW7 228 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 ZNF747Q9BV97 191 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 I3L2K1 104 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 K7EP34 96 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 CLPSL2Q6UWE3 100 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 DKK2Q9UBU2 259 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 TMEM89A2RUT3 159 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 A0A096LPF7 62 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 RSPO3Q9BXY4 272 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-204ENST00000395898 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 C12orf74Q32Q52 190 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 Q9H8V8 135 aa4.26□□□□□ -1.73
VPS13C-204ENST00000395898 K7EIM0 57 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 K7EMT4 169 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 TRACP01848 142 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 GP9P14770 177 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 HHLA3Q9XRX5 114 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 H0YGX0 51 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 COX7A2LO14548 114 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 Q8N9W7 124 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 INSL3P51460 131 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 OTOGLQ3ZCN5 2332 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 CSPG4Q6UVK1 2322 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 GAGE12HA6NDE8 117 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 GPHB5Q86YW7 130 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 ATP6V0E2Q8NHE4 81 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-204ENST00000395898 IGKV2-29A2NJV5 120 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-204ENST00000395898 CRYGCP07315 174 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 IGHV4-61A0A0C4DH41 118 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 CFC1P0CG37 223 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 MED14OSP0DP75 135 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-204ENST00000395898 AJUBAQ96IF1 538 aa4.25□□□□□ -1.73
VPS13C-204ENST00000395898 IGHV4-30-2A0A087WSY4 118 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 FBXL19-AS1Q494R0 122 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 RNASE13Q5GAN3 156 aaKnown RBP4.24□□□□□ -1.73
VPS13C-204ENST00000395898 CXCL5P42830 114 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 ATP5G1P05496 136 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 GYPEP15421 78 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 SLURP1P55000 103 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 DEFB136Q30KP8 78 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 APRG1Q8IVJ8 170 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 MRAPQ8TCY5 172 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 SPG11Q96JI7 2443 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 C4orf3Q8WVX3 66 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 PTPN13Q12923 2485 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 IGKV1OR2-108A0A075B7D4 117 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 CTSGP08311 255 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 IGHV4-38-2P0DP08 117 aa4.24□□□□□ -1.73
VPS13C-204ENST00000395898 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
VPS13C-204ENST00000395898 PIFOQ8TCI5 191 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms