RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 D6R8Y8 96 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
SCAF11-204ENST00000395454 TFPI2P48307 235 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 NXPH4O95158 308 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 RAB4AP20338 218 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 Q8N976 141 aa11.17□□□□□ -0.62
SCAF11-204ENST00000395454 G3V4G9 280 aa11.16□□□□□ -0.62
SCAF11-204ENST00000395454 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
SCAF11-204ENST00000395454 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
SCAF11-204ENST00000395454 AGRNO00468 2067 aa11.16□□□□□ -0.62
SCAF11-204ENST00000395454 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 IGHV1-24A0A0C4DH33 117 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 C7orf71A4D174 169 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 H3BVH4 76 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 ASIPP42127 132 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 PRELID3AQ96N28 172 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 WIPF1O43516 503 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 TSPOP30536 169 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
SCAF11-204ENST00000395454 LINC01546A6NGU7 62 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 J3KRW8 73 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 M0R2Z0 102 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
SCAF11-204ENST00000395454 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 CDKN1BP46527 198 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 PKIAP61925 76 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-204ENST00000395454 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
SCAF11-204ENST00000395454 CKS2P33552 79 aa11.13□□□□□ -0.63
SCAF11-204ENST00000395454 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
SCAF11-204ENST00000395454 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
SCAF11-204ENST00000395454 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
SCAF11-204ENST00000395454 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-204ENST00000395454 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-204ENST00000395454 NPYP01303 97 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 EVI2AP22794 236 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 SSTP61278 116 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 MUC4Q99102 2169 aa11.12□□□□□ -0.63
SCAF11-204ENST00000395454 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 FAM159AQ6UWV7 190 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 H3BMM0 161 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 KRTDAPP60985 99 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 DNAH3Q8TD57 4116 aa11.11□□□□□ -0.63
SCAF11-204ENST00000395454 KIR2DL5BA0A0G2JN68 375 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 KIR2DL5BA0A0G2JPC4 375 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 GNRH2O43555 120 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
SCAF11-204ENST00000395454 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-204ENST00000395454 DEFB131AP59861 70 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 KIR2DL5AQ8N109 375 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 POM121L12Q8N7R1 296 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 PRSS3P2Q8NHM4 247 aa11.1□□□□□ -0.63
SCAF11-204ENST00000395454 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 EGFEM1PQ0D2K5 195 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 FA2HQ7L5A8 372 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 A0A096LNJ9 63 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 NCR2O95944 276 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
SCAF11-204ENST00000395454 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 NRACQ8N912 160 aa11.09□□□□□ -0.63
SCAF11-204ENST00000395454 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
SCAF11-204ENST00000395454 IGHV3-16A0A0C4DH30 117 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 CD7P09564 240 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 MAP1LC3AQ9H492 121 aa11.08□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
SCAF11-204ENST00000395454 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 DPH3P1Q9H4G8 78 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 526.5 ms