RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 RAB19A4D1S5 217 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 PGPEP1LA6NFU8 196 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 TMEM250H0YL14 139 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 NDUFS6O75380 124 aaKnown RBP14.22□□□□□ -0.13
CLDN3-201ENST00000395145 SFTA3P0C7M3 94 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 GNG4P50150 75 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 RNF212Q495C1 297 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 PRO0255Q9UI72 69 aa14.22□□□□□ -0.13
CLDN3-201ENST00000395145 C9JCJ5 164 aa14.21□□□□□ -0.13
CLDN3-201ENST00000395145 CXCL1P09341 107 aa14.21□□□□□ -0.13
CLDN3-201ENST00000395145 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.13
CLDN3-201ENST00000395145 FAM210AQ96ND0 272 aa14.21□□□□□ -0.13
CLDN3-201ENST00000395145 TRGV4A0A0C4DH28 118 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 GRIFINA4D1Z8 144 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 H3BVH4 76 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 RS1O15537 224 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 CRYBA4P53673 196 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 TOR2AQ5JU69 321 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 PRR27Q6MZM9 219 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 SCRT2Q9NQ03 307 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 HHLA3Q9XRX5 114 aa14.2□□□□□ -0.14
CLDN3-201ENST00000395145 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
CLDN3-201ENST00000395145 PAX4O43316 350 aa14.19□□□□□ -0.14
CLDN3-201ENST00000395145 CIDEAO60543 219 aa14.19□□□□□ -0.14
CLDN3-201ENST00000395145 ARMS2P0C7Q2 107 aa14.19□□□□□ -0.14
CLDN3-201ENST00000395145 MED14OSP0DP75 135 aa14.19□□□□□ -0.14
CLDN3-201ENST00000395145 MGST1P10620 155 aaKnown RBP14.18□□□□□ -0.14
CLDN3-201ENST00000395145 FAM3BP58499 235 aaPredicted RBP14.18□□□□□ -0.14
CLDN3-201ENST00000395145 CFAP126Q5VTH2 177 aa14.18□□□□□ -0.14
CLDN3-201ENST00000395145 UBE2DNLQ8IWF7 75 aa14.18□□□□□ -0.14
CLDN3-201ENST00000395145 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
CLDN3-201ENST00000395145 PARLQ9H300 379 aa14.18□□□□□ -0.14
CLDN3-201ENST00000395145 BIN3Q9NQY0 253 aa14.18□□□□□ -0.14
CLDN3-201ENST00000395145 A0A096LPF7 62 aa14.17□□□□□ -0.14
CLDN3-201ENST00000395145 C19orf71A6NCJ1 209 aa14.17□□□□□ -0.14
CLDN3-201ENST00000395145 RPL19P84098 196 aaKnown RBP14.17□□□□□ -0.14
CLDN3-201ENST00000395145 SYT8Q8NBV8 401 aa14.16□□□□□ -0.14
CLDN3-201ENST00000395145 A8MWV9 139 aa14.15□□□□□ -0.14
CLDN3-201ENST00000395145 GATA1P15976 413 aaPredicted RBP14.15□□□□□ -0.14
CLDN3-201ENST00000395145 CCL18P55774 89 aa14.15□□□□□ -0.14
CLDN3-201ENST00000395145 DMRTA1Q5VZB9 504 aa14.15□□□□□ -0.14
CLDN3-201ENST00000395145 PCNPQ8WW12 178 aaKnown RBP14.15□□□□□ -0.14
CLDN3-201ENST00000395145 DAZAP1Q96EP5 407 aaKnown RBP14.15□□□□□ -0.14
CLDN3-201ENST00000395145 PHLDA3Q9Y5J5 127 aa14.15□□□□□ -0.14
CLDN3-201ENST00000395145 ICOSQ9Y6W8 199 aa14.15□□□□□ -0.14
CLDN3-201ENST00000395145 SNAI2O43623 268 aa14.14□□□□□ -0.15
CLDN3-201ENST00000395145 SSBP4Q9BWG4 385 aaPredicted RBP14.14□□□□□ -0.15
CLDN3-201ENST00000395145 ZFP2Q6ZN57 461 aa14.13□□□□□ -0.15
CLDN3-201ENST00000395145 OCC1Q8TAD7 63 aa14.13□□□□□ -0.15
CLDN3-201ENST00000395145 LINC00588Q9Y4M8 146 aa14.13□□□□□ -0.15
CLDN3-201ENST00000395145 K7EN84 100 aa14.12□□□□□ -0.15
CLDN3-201ENST00000395145 NXPH4O95158 308 aa14.12□□□□□ -0.15
CLDN3-201ENST00000395145 SRP19P09132 144 aaKnown RBP14.12□□□□□ -0.15
CLDN3-201ENST00000395145 OR5AL1P0C617 328 aa14.12□□□□□ -0.15
CLDN3-201ENST00000395145 RPS20P60866 119 aaKnown RBP14.12□□□□□ -0.15
CLDN3-201ENST00000395145 MRPL23Q16540 153 aaKnown RBP14.12□□□□□ -0.15
CLDN3-201ENST00000395145 ZFP82Q8N141 532 aa14.12□□□□□ -0.15
CLDN3-201ENST00000395145 P01737 135 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 ESRGQ1W209 222 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 UFSP1Q6NVU6 142 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 OR2D3Q8NGH3 330 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 SFRP2Q96HF1 295 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 JPT2Q9H910 190 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 LY96Q9Y6Y9 160 aa14.11□□□□□ -0.15
CLDN3-201ENST00000395145 TRBV6-4A0A1B0GX49 114 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 K7EQD1 137 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 M0R381 172 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 GYPEP15421 78 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 CEBPGP53567 150 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 ZNRF2Q8NHG8 242 aa14.1□□□□□ -0.15
CLDN3-201ENST00000395145 IGHV3-73A0A0B4J1V6 119 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 XKRY2A2RUG3 117 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 RHODO00212 210 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 IGLC6P0CF74 106 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 SLC25A29Q8N8R3 303 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 NUDT10Q8NFP7 164 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 OR10AG1Q8NH19 301 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 NUDT11Q96G61 164 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 SMIM7Q9BQ49 75 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 UPK3BQ9BT76 320 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
CLDN3-201ENST00000395145 RHOHQ15669 191 aa14.08□□□□□ -0.16
CLDN3-201ENST00000395145 NEGR1Q7Z3B1 354 aa14.08□□□□□ -0.16
CLDN3-201ENST00000395145 PRADC1Q9BSG0 188 aa14.08□□□□□ -0.16
CLDN3-201ENST00000395145 SMDT1Q9H4I9 107 aa14.08□□□□□ -0.16
CLDN3-201ENST00000395145 MRPS16Q9Y3D3 137 aaKnown RBP14.08□□□□□ -0.16
CLDN3-201ENST00000395145 CRYGDP07320 174 aa14.07□□□□□ -0.16
CLDN3-201ENST00000395145 GZMBP10144 247 aa14.07□□□□□ -0.16
CLDN3-201ENST00000395145 SRIP30626 198 aa14.07□□□□□ -0.16
CLDN3-201ENST00000395145 LOC100131303A0A0U1RQF7 123 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 ZNF727A8MUV8 499 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 PEA15Q15121 130 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 Q6ZSN1 163 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 SH2D6Q7Z4S9 175 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 FER1L6-AS1Q8NA97 138 aa14.06□□□□□ -0.16
CLDN3-201ENST00000395145 RNASE7Q9H1E1 156 aaKnown RBP14.06□□□□□ -0.16
CLDN3-201ENST00000395145 C9JQL5 133 aa14.05□□□□□ -0.16
CLDN3-201ENST00000395145 SRSF3P84103 164 aaKnown RBP14.05□□□□□ -0.16
CLDN3-201ENST00000395145 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
CLDN3-201ENST00000395145 SPANXN1Q5VSR9 72 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms