RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 RAB24Q969Q5 203 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 OTORQ9NRC9 128 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 DIRC3C9JPN6 131 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 GNRH2O43555 120 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 PFN1P07737 140 aaKnown RBP10.39□□□□□ -0.75
SNCA-205ENST00000394991 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 CHAC1Q9BUX1 264 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
SNCA-205ENST00000394991 NAGKQ9UJ70 344 aa10.39□□□□□ -0.75
SNCA-205ENST00000394991 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
SNCA-205ENST00000394991 STAG3L2P0CL84 134 aa10.38□□□□□ -0.75
SNCA-205ENST00000394991 STAG3L3P0CL85 134 aa10.38□□□□□ -0.75
SNCA-205ENST00000394991 TAAR5O14804 337 aa10.37□□□□□ -0.75
SNCA-205ENST00000394991 TYMSP04818 313 aa10.37□□□□□ -0.75
SNCA-205ENST00000394991 GCHFRP30047 84 aa10.37□□□□□ -0.75
SNCA-205ENST00000394991 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
SNCA-205ENST00000394991 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
SNCA-205ENST00000394991 CXorf1O96002 111 aa10.36□□□□□ -0.75
SNCA-205ENST00000394991 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
SNCA-205ENST00000394991 GNG5P63218 68 aa10.36□□□□□ -0.75
SNCA-205ENST00000394991 AKR1C8PQ5T2L2 129 aa10.36□□□□□ -0.75
SNCA-205ENST00000394991 GOLT1AQ6ZVE7 132 aa10.36□□□□□ -0.75
SNCA-205ENST00000394991 RHOHQ15669 191 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 GTSF1LQ9H1H1 148 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 LENEPQ9Y5L5 61 aa10.35□□□□□ -0.75
SNCA-205ENST00000394991 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
SNCA-205ENST00000394991 RS1O15537 224 aa10.34□□□□□ -0.75
SNCA-205ENST00000394991 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
SNCA-205ENST00000394991 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
SNCA-205ENST00000394991 ATP6V0E2Q8NHE4 81 aa10.34□□□□□ -0.75
SNCA-205ENST00000394991 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
SNCA-205ENST00000394991 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
SNCA-205ENST00000394991 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 CTXND1A0A1B0GTU2 59 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 RBFOX3A6NFN3 312 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 IGLV2-8P01709 118 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 ZNF726P1Q15940 193 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 KCNRGQ8N5I3 272 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 OR11H4Q8NGC9 324 aa10.33□□□□□ -0.76
SNCA-205ENST00000394991 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 HMSDA8MTL9 139 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 F6UZH7 168 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 SUMO1P63165 101 aaKnown RBP10.32□□□□□ -0.76
SNCA-205ENST00000394991 ZNF345Q14585 488 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 C5orf17Q8NAS9 161 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
SNCA-205ENST00000394991 TRAV21A0A0B4J279 112 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 A0A0D9SG52 128 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 TCRAP04437 139 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
SNCA-205ENST00000394991 ZNF876PQ49A33 203 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 DAZAP1Q96EP5 407 aaKnown RBP10.31□□□□□ -0.76
SNCA-205ENST00000394991 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
SNCA-205ENST00000394991 K7EQM0 130 aa10.3□□□□□ -0.76
SNCA-205ENST00000394991 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
SNCA-205ENST00000394991 UBE2G2P60604 165 aa10.3□□□□□ -0.76
SNCA-205ENST00000394991 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
SNCA-205ENST00000394991 ZNF471Q9BX82 626 aaPredicted RBP10.3□□□□□ -0.76
SNCA-205ENST00000394991 TREM1Q9NP99 234 aa10.3□□□□□ -0.76
SNCA-205ENST00000394991 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 GGTLC3B5MD39 225 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 BCL2L11O43521 198 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 CIDEAO60543 219 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 PFDN1O60925 122 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 TOR2AQ5JU69 321 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 Q8N976 141 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 NDFIP1Q9BT67 221 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 EPDR1Q9UM22 224 aa10.29□□□□□ -0.76
SNCA-205ENST00000394991 LRP2P98164 4655 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 A0A1W2PRE2 83 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 IFNA7P01567 189 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 TMUB2Q71RG4 321 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 PSG8Q9UQ74 426 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
SNCA-205ENST00000394991 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 MGST1P10620 155 aaKnown RBP10.27□□□□□ -0.77
SNCA-205ENST00000394991 FHITP49789 147 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 ZNF506Q5JVG8 444 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 PRNTQ86SH4 94 aa10.27□□□□□ -0.77
SNCA-205ENST00000394991 CYB561D1Q8N8Q1 229 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms