RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 SPRNQ5BIV9 151 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 A4D1N5 150 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 GREB1LQ9C091 1923 aaPredicted RBP9.59□□□□□ -0.87
SIN3A-202ENST00000394947 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 LCTP09848 1927 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 WI2-2373I1.2A0A1W2PRP0 233 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 MSRB1Q9NZV6 116 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 EML6Q6ZMW3 1958 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 LTAP01374 205 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 CRYGBP07316 175 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 LOXP28300 417 aaPredicted RBP9.59□□□□□ -0.87
SIN3A-202ENST00000394947 NCKAP5O14513 1909 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 J3QKU1 62 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
SIN3A-202ENST00000394947 FNDC10F2Z333 226 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 FAM186AA6NE01 2351 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 RETNQ9HD89 108 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 WFDC2Q14508 124 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 ATP5G1P05496 136 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 FOXI1Q12951 378 aa9.58□□□□□ -0.88
SIN3A-202ENST00000394947 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
SIN3A-202ENST00000394947 LRRC37AA6NMS7 1700 aa9.57□□□□□ -0.88
SIN3A-202ENST00000394947 SIPA1L3O60292 1781 aaPredicted RBP9.57□□□□□ -0.88
SIN3A-202ENST00000394947 HHLA3Q9XRX5 114 aa9.57□□□□□ -0.88
SIN3A-202ENST00000394947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.57□□□□□ -0.886e-7■■■■□ 23.5
SIN3A-202ENST00000394947 COL18A1P39060 1754 aa9.57□□□□□ -0.88
SIN3A-202ENST00000394947 ARHGAP21Q5T5U3 1957 aa9.57□□□□□ -0.88
SIN3A-202ENST00000394947 ABCA1O95477 2261 aa9.57□□□□□ -0.88
SIN3A-202ENST00000394947 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 RALGAPA2Q2PPJ7 1873 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 COL6A6A6NMZ7 2263 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
SIN3A-202ENST00000394947 LYL1P12980 280 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 Q6ZS92 163 aa9.56□□□□□ -0.88
SIN3A-202ENST00000394947 LMO1P25800 156 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 TNS1Q9HBL0 1735 aaKnown RBP9.55□□□□□ -0.88
SIN3A-202ENST00000394947 TRBV12-3P01733 135 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 ZFP36P26651 326 aaKnown RBP9.55□□□□□ -0.88
SIN3A-202ENST00000394947 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 LGALS9O00182 355 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 IGLC1P0CG04 106 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 BLCAPP62952 87 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 TDRG1Q3Y452 100 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 PTH2Q96A98 100 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 C3orf22Q8N5N4 141 aa9.55□□□□□ -0.88
SIN3A-202ENST00000394947 TICRRQ7Z2Z1 1910 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 A0A0G2JMZ2 1700 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 LRRC37A2A6NM11 1700 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 CACNA1GO43497 2377 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 IGHV2-70P01814 119 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 ZNF491Q8N8L2 437 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 C20orf78Q9BR46 151 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 CFPP27918 469 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 HERV-K104P63124 156 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 PYGO2Q9BRQ0 406 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 K7ENP7 123 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 DEFB125Q8N687 156 aa9.54□□□□□ -0.88
SIN3A-202ENST00000394947 SLPIP03973 132 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 C11orf52Q96A22 123 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 P0DMU3 169 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 FAM231AP0DMU4 169 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 FAM231CP0DMU5 169 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 VPREB3Q9UKI3 123 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 SPTA1P02549 2419 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 ZNF747Q9BV97 191 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 NDUFA1O15239 70 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 AJUBAQ96IF1 538 aa9.53□□□□□ -0.88
SIN3A-202ENST00000394947 TMEM14CQ9P0S9 112 aa9.52□□□□□ -0.88
SIN3A-202ENST00000394947 Q8N1Y9 231 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 WDR81Q562E7 1941 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 ADAMTS7Q9UKP4 1686 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.52□□□□□ -0.89
SIN3A-202ENST00000394947 J3KT08 172 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 FXYD2P54710 66 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 PRSS33Q8NF86 280 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 DSCAML1Q8TD84 2053 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 NUPR1O60356 82 aa9.52□□□□□ -0.89
SIN3A-202ENST00000394947 ATOX1O00244 68 aa9.51□□□□□ -0.89
SIN3A-202ENST00000394947 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
SIN3A-202ENST00000394947 PRR4Q16378 134 aa9.51□□□□□ -0.89
SIN3A-202ENST00000394947 LOXL1Q08397 574 aaPredicted RBP9.51□□□□□ -0.89
SIN3A-202ENST00000394947 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
SIN3A-202ENST00000394947 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
SIN3A-202ENST00000394947 B9D2Q9BPU9 175 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms