RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 IGIPA6NJ69 53 aa17.25■□□□□ 0.35
RARA-202ENST00000394081 CLEC19AQ6UXS0 136 aa17.25■□□□□ 0.35
RARA-202ENST00000394081 TEX29Q8N6K0 151 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 TIMM17AQ99595 171 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 CITED1Q99966 193 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 KALRNO60229 2985 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 DUSP14O95147 198 aaKnown RBP17.24■□□□□ 0.35
RARA-202ENST00000394081 NXPH4O95158 308 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 SRD5A1P18405 259 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 SFTA2Q6UW10 78 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 DCHS1Q96JQ0 3298 aa17.24■□□□□ 0.35
RARA-202ENST00000394081 OVOL1O14753 267 aa17.23■□□□□ 0.35
RARA-202ENST00000394081 LINC01600Q96MT4 127 aa17.23■□□□□ 0.35
RARA-202ENST00000394081 TSHBP01222 138 aa17.23■□□□□ 0.35
RARA-202ENST00000394081 ECSCRQ19T08 205 aa17.23■□□□□ 0.35
RARA-202ENST00000394081 SPTBN4Q9H254 2564 aa17.23■□□□□ 0.35
RARA-202ENST00000394081 TRBV7-9A0A0J9YWB2 115 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 MGPP08493 103 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 SCGB1C2P0DMR2 95 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 GAGE5Q13069 117 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 GAGE6Q13070 117 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 APRG1Q8IVJ8 170 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 OR10J6PQ8NGY7 276 aa17.22■□□□□ 0.35
RARA-202ENST00000394081 IGHV3OR16-13A0A075B7E8 117 aa17.21■□□□□ 0.35
RARA-202ENST00000394081 IGHV3-74A0A0B4J1X5 117 aa17.21■□□□□ 0.35
RARA-202ENST00000394081 ATP6V0E1O15342 81 aa17.21■□□□□ 0.35
RARA-202ENST00000394081 TP53TG1Q9Y2A0 90 aa17.21■□□□□ 0.34
RARA-202ENST00000394081 DMXL1Q9Y485 3027 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 SLC25A20O43772 301 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 P0DMU3 169 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 FAM231AP0DMU4 169 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 FAM231CP0DMU5 169 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 AMELXQ99217 191 aa17.2■□□□□ 0.34
RARA-202ENST00000394081 FAM19A4Q96LR4 140 aa17.19■□□□□ 0.34
RARA-202ENST00000394081 EP300Q09472 2414 aaPredicted RBP17.19■□□□□ 0.34
RARA-202ENST00000394081 LINC01548A6NM66 108 aa17.19■□□□□ 0.34
RARA-202ENST00000394081 POLR2KP53803 58 aaKnown RBP17.19■□□□□ 0.34
RARA-202ENST00000394081 ANXA2RQ3ZCQ2 193 aa17.19■□□□□ 0.34
RARA-202ENST00000394081 Q6ZS46 218 aa17.19■□□□□ 0.34
RARA-202ENST00000394081 GVINP1Q7Z2Y8 2422 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 A0A0B4J2C4 111 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 ZNF876PQ49A33 203 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 C20orf173Q96LM9 149 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 RHODO00212 210 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 KIF25-AS1Q9Y6Z4 181 aa17.18■□□□□ 0.34
RARA-202ENST00000394081 J3QQQ9 107 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 VCYO14598 125 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 TSPEAR-AS2P59090 65 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 ZNF292O60281 2723 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 IGHV3-49A0A0A0MS15 119 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 IGF1P05019 195 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 KIR2DL4Q99706 377 aa17.17■□□□□ 0.34
RARA-202ENST00000394081 TPRP12270 2363 aaKnown RBP17.16■□□□□ 0.34
RARA-202ENST00000394081 RNASE3P12724 160 aaKnown RBP17.16■□□□□ 0.34
RARA-202ENST00000394081 LINC00315P59091 139 aa17.16■□□□□ 0.34
RARA-202ENST00000394081 Q6Q795 121 aa17.16■□□□□ 0.34
RARA-202ENST00000394081 Q8NA96 180 aa17.16■□□□□ 0.34
RARA-202ENST00000394081 AJUBAQ96IF1 538 aa17.16■□□□□ 0.34
RARA-202ENST00000394081 IGHV3-33P01772 117 aa17.16■□□□□ 0.34
RARA-202ENST00000394081 LGALS3P17931 250 aaKnown RBP17.16■□□□□ 0.34
RARA-202ENST00000394081 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.34
RARA-202ENST00000394081 TMEM170BQ5T4T1 132 aa17.14■□□□□ 0.33
RARA-202ENST00000394081 SOCS3O14543 225 aa17.14■□□□□ 0.33
RARA-202ENST00000394081 TMEM263Q8WUH6 116 aaKnown RBP17.14■□□□□ 0.33
RARA-202ENST00000394081 C9JAW5 83 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 GATA3P23771 443 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 NBL1P41271 181 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 BOD1L1Q8NFC6 3051 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.13■□□□□ 0.33
RARA-202ENST00000394081 LEPROTO15243 131 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 GAGE2BQ13066 116 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 GAGE2EQ4V326 116 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 ZNRF2Q8NHG8 242 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 LINC01560Q8TB33 94 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 SIRPDQ9H106 197 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 SPANXA1Q9NS26 97 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 GAGE2DQ9UEU5 116 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 ARHGAP32A7KAX9 2087 aa17.13■□□□□ 0.33
RARA-202ENST00000394081 WNK2Q9Y3S1 2297 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 FAM223BA6NKX1 122 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 FBXL19-AS1Q494R0 122 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 FAM223AQ8IWN6 122 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 POLEQ07864 2286 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 CEP250Q9BV73 2442 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 PCNX1Q96RV3 2341 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 A0A0J9YX75 114 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 TRBV6-5A0A0K0K1A5 114 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 TRBV27A0A0K0K1C4 114 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 A4D1N5 150 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 SNCGO76070 127 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 IGHV1-69P01742 117 aa17.12■□□□□ 0.33
RARA-202ENST00000394081 RPL13AP40429 203 aaKnown RBP17.12■□□□□ 0.33
RARA-202ENST00000394081 G3V318 75 aa17.11■□□□□ 0.33
RARA-202ENST00000394081 ATXN8Q156A1 80 aa17.11■□□□□ 0.33
RARA-202ENST00000394081 J3KRW8 73 aa17.1■□□□□ 0.33
RARA-202ENST00000394081 NHLRC4P0CG21 123 aaPredicted RBP17.1■□□□□ 0.33
RARA-202ENST00000394081 UBE2E1P51965 193 aa17.1■□□□□ 0.33
RARA-202ENST00000394081 EMP1P54849 157 aa17.1■□□□□ 0.33
RARA-202ENST00000394081 SPRY2O43597 315 aa17.1■□□□□ 0.33
RARA-202ENST00000394081 LY6HO94772 140 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms