RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ZNF493Q6ZR52 646 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 IGLC3P0DOY3 106 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-202ENST00000392770 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 DNAJC9-AS1A6NH13 148 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 SUMO4Q6EEV6 95 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
SCN3B-202ENST00000392770 RNASE13Q5GAN3 156 aaKnown RBP12.75□□□□□ -0.37
SCN3B-202ENST00000392770 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
SCN3B-202ENST00000392770 PSCAO43653 123 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 DEFB1P60022 68 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 VWC2LB2RUY7 222 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 ATXN8Q156A1 80 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 CD5LO43866 347 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 AKAP6Q13023 2319 aa12.74□□□□□ -0.37
SCN3B-202ENST00000392770 COL4A2P08572 1712 aa12.73□□□□□ -0.37
SCN3B-202ENST00000392770 COX8AP10176 69 aa12.73□□□□□ -0.37
SCN3B-202ENST00000392770 JPT2Q9H910 190 aa12.73□□□□□ -0.37
SCN3B-202ENST00000392770 CDSNQ15517 529 aa12.73□□□□□ -0.37
SCN3B-202ENST00000392770 RNF152Q8N8N0 203 aa12.73□□□□□ -0.37
SCN3B-202ENST00000392770 TRBV6-1A0A0K0K1D8 114 aa12.72□□□□□ -0.37
SCN3B-202ENST00000392770 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
SCN3B-202ENST00000392770 F8VRH5 84 aa12.72□□□□□ -0.37
SCN3B-202ENST00000392770 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
SCN3B-202ENST00000392770 RHOHQ15669 191 aa12.72□□□□□ -0.37
SCN3B-202ENST00000392770 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-202ENST00000392770 Q6YL49 198 aa12.71□□□□□ -0.37
SCN3B-202ENST00000392770 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
SCN3B-202ENST00000392770 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.37
SCN3B-202ENST00000392770 DLEU1O43261 78 aa12.71□□□□□ -0.38
SCN3B-202ENST00000392770 NUPR1O60356 82 aa12.71□□□□□ -0.38
SCN3B-202ENST00000392770 GHRHP01286 108 aa12.71□□□□□ -0.38
SCN3B-202ENST00000392770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-202ENST00000392770 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 IGKV2-29A2NJV5 120 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-202ENST00000392770 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 SPINK8P0C7L1 97 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 Q8N1Y9 231 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 TTC28Q96AY4 2481 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 A0A0J9YY99 117 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 K7EMI3 77 aa12.7□□□□□ -0.38
SCN3B-202ENST00000392770 DLX4Q92988 240 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-202ENST00000392770 SNHG12Q9BXW3 62 aa12.69□□□□□ -0.38
SCN3B-202ENST00000392770 IGF1P05019 195 aa12.69□□□□□ -0.38
SCN3B-202ENST00000392770 WFDC11Q8NEX6 87 aa12.69□□□□□ -0.38
SCN3B-202ENST00000392770 IGHG4P01861 327 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 MYCNOSP40205 109 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 CDPF1Q6NVV7 123 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 EBI3Q14213 229 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 COX11Q9Y6N1 276 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 CPAMD8Q8IZJ3 1885 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 ABCA4P78363 2273 aa12.68□□□□□ -0.38
SCN3B-202ENST00000392770 CLPSL1A2RUU4 121 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 C19orf71A6NCJ1 209 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 HERVK_113P63121 156 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 COA6Q5JTJ3 125 aaKnown RBP12.67□□□□□ -0.38
SCN3B-202ENST00000392770 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 FRMD6-AS1P0C7T7 363 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 K7EQD1 137 aa12.67□□□□□ -0.38
SCN3B-202ENST00000392770 ZNF561-AS1K7EIQ3 104 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 PFN2P35080 140 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 CTRLP40313 264 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 UBE2V1Q13404 147 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 HIST2H2BCQ6DN03 193 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 MRAPQ8TCY5 172 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 SIGMAR1Q99720 223 aa12.66□□□□□ -0.38
SCN3B-202ENST00000392770 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.38
SCN3B-202ENST00000392770 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
SCN3B-202ENST00000392770 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
SCN3B-202ENST00000392770 ANGP03950 147 aaKnown RBP12.65□□□□□ -0.38
SCN3B-202ENST00000392770 CHD3Q12873 2000 aaKnown RBP12.65□□□□□ -0.38
SCN3B-202ENST00000392770 J3QQQ9 107 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 IGLV2-8P01709 118 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 CEND1Q8N111 149 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
SCN3B-202ENST00000392770 A0A0J9YX75 114 aa12.63□□□□□ -0.39
SCN3B-202ENST00000392770 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
SCN3B-202ENST00000392770 PIFOQ8TCI5 191 aa12.63□□□□□ -0.39
SCN3B-202ENST00000392770 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-202ENST00000392770 Q6ZQT7 251 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 OVOL2Q9BRP0 275 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 LINC00322Q6ZN03 302 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-202ENST00000392770 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
SCN3B-202ENST00000392770 C9orf118A6NHY6 69 aa12.61□□□□□ -0.39
SCN3B-202ENST00000392770 LURAP1LQ8IV03 231 aa12.61□□□□□ -0.39
SCN3B-202ENST00000392770 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
SCN3B-202ENST00000392770 SIVA1O15304 175 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 EXPH5Q8NEV8 1989 aa12.6□□□□□ -0.39
SCN3B-202ENST00000392770 GYPEP15421 78 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms