RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ZNF124Q15973 351 aa11.26□□□□□ -0.61
PSME4-201ENST00000389993 Q8N8P6 123 aa11.26□□□□□ -0.61
PSME4-201ENST00000389993 CMC4P56277 68 aaPredicted RBP11.26□□□□□ -0.61
PSME4-201ENST00000389993 IGLL1P15814 213 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 ZNF843Q8N446 348 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 HCFC1P51610 2035 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 BUB3O43684 328 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 LMO4P61968 165 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 JPT2Q9H910 190 aa11.25□□□□□ -0.61
PSME4-201ENST00000389993 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 TDRG1Q3Y452 100 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 FANCD2OSQ96PS1 177 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 CACNA1AO00555 2505 aa11.24□□□□□ -0.61
PSME4-201ENST00000389993 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
PSME4-201ENST00000389993 ZNF295-AS1Q8N0V1 137 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
PSME4-201ENST00000389993 PCP4P48539 62 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 SS18Q15532 418 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 Q9HAA7 133 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 XCL1P47992 114 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 RASL10AQ92737 203 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
PSME4-201ENST00000389993 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
PSME4-201ENST00000389993 TMEM238C9JI98 176 aa11.22□□□□□ -0.61
PSME4-201ENST00000389993 IGKV1D-37A0A075B6S9 117 aa11.22□□□□□ -0.61
PSME4-201ENST00000389993 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
PSME4-201ENST00000389993 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
PSME4-201ENST00000389993 DNAJC9-AS1A6NH13 148 aa11.22□□□□□ -0.61
PSME4-201ENST00000389993 C2orf70A6NJV1 201 aa11.22□□□□□ -0.61
PSME4-201ENST00000389993 TMEM86BQ8N661 226 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 CT83Q5H943 113 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 IGF1P05019 195 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
PSME4-201ENST00000389993 Q8N1Y9 231 aa11.21□□□□□ -0.62
PSME4-201ENST00000389993 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.62
PSME4-201ENST00000389993 Q6ZS46 218 aa11.21□□□□□ -0.62
PSME4-201ENST00000389993 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.62
PSME4-201ENST00000389993 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.62
PSME4-201ENST00000389993 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 A8MWV9 139 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 PMVKQ15126 192 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 SLC25A20O43772 301 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
PSME4-201ENST00000389993 SNHG12Q9BXW3 62 aa11.2□□□□□ -0.62
PSME4-201ENST00000389993 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 LINC00322Q6ZN03 302 aaPredicted RBP11.19□□□□□ -0.62
PSME4-201ENST00000389993 C10orf126Q8N4M7 172 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
PSME4-201ENST00000389993 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 PCP2Q8IVA1 136 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
PSME4-201ENST00000389993 PIFOQ8TCI5 191 aa11.19□□□□□ -0.62
PSME4-201ENST00000389993 ADAMTS20P59510 1910 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 APOC4P55056 127 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 SMR3AQ99954 134 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 P0DMU3 169 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 FAM231AP0DMU4 169 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 FAM231CP0DMU5 169 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 FBXL19-AS1Q494R0 122 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 PRRC2AP48634 2157 aaKnown RBP11.18□□□□□ -0.62
PSME4-201ENST00000389993 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
PSME4-201ENST00000389993 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
PSME4-201ENST00000389993 SEC11AP67812 179 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 RAI1Q7Z5J4 1906 aaPredicted RBP11.17□□□□□ -0.62
PSME4-201ENST00000389993 IGHV3-30P01768 117 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 IGHV3-30-3P0DP02 117 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 IGHV3-30-5P0DP03 117 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 C5orf38Q86SI9 138 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 HIVEP2P31629 2446 aa11.17□□□□□ -0.62
PSME4-201ENST00000389993 A6NDX4 124 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 CPAMD8Q8IZJ3 1885 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 PRSS29PA6NIE9 313 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 PRM2P04554 102 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 CGB3P0DN86 165 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 CGB7P0DN87 165 aa11.16□□□□□ -0.62
PSME4-201ENST00000389993 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms