RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 CHCHD5Q9BSY4 110 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 DKK2Q9UBU2 259 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 MLST8Q9BVC4 326 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 PKD1L2Q7Z442 2459 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 CHAC1Q9BUX1 264 aa13.71□□□□□ -0.21
UBL3-201ENST00000380680 ADAMTS20P59510 1910 aa13.71□□□□□ -0.21
UBL3-201ENST00000380680 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
UBL3-201ENST00000380680 CD5LO43866 347 aa13.71□□□□□ -0.21
UBL3-201ENST00000380680 J3QKU1 62 aa13.71□□□□□ -0.22
UBL3-201ENST00000380680 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.22
UBL3-201ENST00000380680 COPS9Q8WXC6 57 aa13.71□□□□□ -0.22
UBL3-201ENST00000380680 CCDC140Q96MF4 163 aa13.71□□□□□ -0.22
UBL3-201ENST00000380680 COX8AP10176 69 aa13.7□□□□□ -0.22
UBL3-201ENST00000380680 ATP6V0BQ99437 205 aa13.7□□□□□ -0.22
UBL3-201ENST00000380680 COX11Q9Y6N1 276 aa13.7□□□□□ -0.22
UBL3-201ENST00000380680 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
UBL3-201ENST00000380680 FASNP49327 2511 aaKnown RBP13.7□□□□□ -0.22
UBL3-201ENST00000380680 CFAP54Q96N23 3096 aa13.69□□□□□ -0.22
UBL3-201ENST00000380680 UBE2V1Q13404 147 aa13.69□□□□□ -0.22
UBL3-201ENST00000380680 TNFRSF13BO14836 293 aaPredicted RBP13.69□□□□□ -0.22
UBL3-201ENST00000380680 DSCAML1Q8TD84 2053 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 PCP4P48539 62 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 ADARB2-AS1A8MUL3 147 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 GDF5OSQ5U4N7 250 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 SPXQ9BT56 116 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 ESDP10768 282 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 SLURP1P55000 103 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 EBI3Q14213 229 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 MEGF9Q9H1U4 602 aa13.68□□□□□ -0.22
UBL3-201ENST00000380680 Q71RC1 249 aaPredicted RBP13.67□□□□□ -0.22
UBL3-201ENST00000380680 C1QTNF4Q9BXJ3 329 aa13.67□□□□□ -0.22
UBL3-201ENST00000380680 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
UBL3-201ENST00000380680 ZNF80P51504 273 aaPredicted RBP13.67□□□□□ -0.22
UBL3-201ENST00000380680 A0A1B0GXF2 115 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 A6NDX4 124 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 F8VRH5 84 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 OR5A1Q8NGJ0 315 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 C20orf78Q9BR46 151 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 C9orf47Q6ZRZ4 202 aa13.66□□□□□ -0.22
UBL3-201ENST00000380680 RHODO00212 210 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 DEFB130BP0DP73 79 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 DEFB130AP0DP74 79 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 PMVKQ15126 192 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 TRAV13-1A0A0B4J241 112 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 PLEKHB2Q96CS7 222 aa13.65□□□□□ -0.22
UBL3-201ENST00000380680 A8MWV9 139 aa13.64□□□□□ -0.23
UBL3-201ENST00000380680 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
UBL3-201ENST00000380680 RPL39LQ96EH5 51 aaKnown RBP13.64□□□□□ -0.23
UBL3-201ENST00000380680 NPC2P61916 151 aa13.64□□□□□ -0.23
UBL3-201ENST00000380680 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
UBL3-201ENST00000380680 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 A0A087WW49 117 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 TMEM238C9JI98 176 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 I3L3M4 83 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 CTRLP40313 264 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 CFHR3Q02985 330 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 MYCNOSP40205 109 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 IGHV3-38A0A0C4DH36 116 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 NPSP0C0P6 89 aa13.63□□□□□ -0.23
UBL3-201ENST00000380680 Q6ZVH6 145 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 PCP2Q8IVA1 136 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 HLA-DRB4P13762 266 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 PAX2Q02962 417 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 ZNF493Q6ZR52 646 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 GPHB5Q86YW7 130 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 RNF114Q9Y508 228 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 HLA-DRB4X5D2U9 266 aa13.62□□□□□ -0.23
UBL3-201ENST00000380680 K7EMT4 169 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 ANKRD39Q53RE8 183 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 DNAL4O96015 105 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 GAGE1Q13065 139 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 GAGE4Q13068 117 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 GAGE5Q13069 117 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 GAGE13Q4V321 117 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 LINC01545Q5VT33 79 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
UBL3-201ENST00000380680 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 WDFY4Q6ZS81 3184 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 AZU1P20160 251 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 BVES-AS1Q5T3Y7 98 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 ZNRF2Q8NHG8 242 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
UBL3-201ENST00000380680 A0A087WX48 190 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 PRSS29PA6NIE9 313 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 CCL24O00175 119 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 TP53TG3Q9ULZ0 132 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 IGF1P05019 195 aa13.59□□□□□ -0.23
UBL3-201ENST00000380680 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.23
UBL3-201ENST00000380680 CRIP1P50238 77 aa13.58□□□□□ -0.23
UBL3-201ENST00000380680 Q8N6K4 173 aa13.58□□□□□ -0.23
UBL3-201ENST00000380680 GAGE7O76087 117 aa13.58□□□□□ -0.24
UBL3-201ENST00000380680 GAGE12FP0CL80 117 aa13.58□□□□□ -0.24
UBL3-201ENST00000380680 GAGE12GP0CL81 117 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms