RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 MS4A6AQ9H2W1 248 aa11.78□□□□□ -0.52
BRF1-203ENST00000379937 TMEM8BA6NDV4 472 aa11.78□□□□□ -0.52
BRF1-203ENST00000379937 JMJD8Q96S16 334 aa11.78□□□□□ -0.52
BRF1-203ENST00000379937 TMEM208Q9BTX3 173 aa11.78□□□□□ -0.52
BRF1-203ENST00000379937 NPIPB6E9PJ23 425 aa11.77□□□□□ -0.52
BRF1-203ENST00000379937 ZNF56Q15929 161 aa11.77□□□□□ -0.52
BRF1-203ENST00000379937 LYPD1Q8N2G4 141 aa11.77□□□□□ -0.52
BRF1-203ENST00000379937 CTRLP40313 264 aa11.77□□□□□ -0.53
BRF1-203ENST00000379937 CFHR3Q02985 330 aa11.77□□□□□ -0.53
BRF1-203ENST00000379937 ARL6IP6Q8N6S5 226 aa11.77□□□□□ -0.53
BRF1-203ENST00000379937 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
BRF1-203ENST00000379937 Q9UF83 564 aa11.77□□□□□ -0.53
BRF1-203ENST00000379937 IGHV4-31P0DP07 118 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 RASL11AQ6T310 242 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 IGHV3-38A0A0C4DH36 116 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 C16orf54Q6UWD8 224 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 IFI27L1Q96BM0 104 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
BRF1-203ENST00000379937 ZNF575Q86XF7 245 aa11.75□□□□□ -0.53
BRF1-203ENST00000379937 A0A096LNJ9 63 aa11.75□□□□□ -0.53
BRF1-203ENST00000379937 PLA2G2AP14555 144 aa11.75□□□□□ -0.53
BRF1-203ENST00000379937 RPL39P62891 51 aaKnown RBP11.75□□□□□ -0.53
BRF1-203ENST00000379937 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
BRF1-203ENST00000379937 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
BRF1-203ENST00000379937 M0QZK8 103 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 ASIPP42127 132 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 RNF151Q2KHN1 245 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 KLF5Q13887 457 aaPredicted RBP11.73□□□□□ -0.53
BRF1-203ENST00000379937 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
BRF1-203ENST00000379937 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 ZFAND2AQ8N6M9 145 aa11.73□□□□□ -0.53
BRF1-203ENST00000379937 FAM223BA6NKX1 122 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 HBDP02042 147 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 GCSHP23434 173 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 FAM223AQ8IWN6 122 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 GFRA4Q9GZZ7 299 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 NDUFA4O00483 81 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 CT83Q5H943 113 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
BRF1-203ENST00000379937 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
BRF1-203ENST00000379937 IGKV2D-26A0A0A0MRZ7 120 aa11.71□□□□□ -0.53
BRF1-203ENST00000379937 NDUFS8O00217 210 aa11.71□□□□□ -0.53
BRF1-203ENST00000379937 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
BRF1-203ENST00000379937 TMEM61Q8N0U2 210 aa11.71□□□□□ -0.53
BRF1-203ENST00000379937 DLX4Q92988 240 aaPredicted RBP11.71□□□□□ -0.53
BRF1-203ENST00000379937 VPREB3Q9UKI3 123 aa11.71□□□□□ -0.53
BRF1-203ENST00000379937 K7ERJ3 54 aa11.71□□□□□ -0.54
BRF1-203ENST00000379937 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.54
BRF1-203ENST00000379937 SMIM12Q96EX1 92 aa11.71□□□□□ -0.54
BRF1-203ENST00000379937 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
BRF1-203ENST00000379937 MRPL35Q9NZE8 188 aaKnown RBP11.7□□□□□ -0.54
BRF1-203ENST00000379937 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
BRF1-203ENST00000379937 CD300EQ496F6 205 aaPredicted RBP11.7□□□□□ -0.54
BRF1-203ENST00000379937 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
BRF1-203ENST00000379937 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
BRF1-203ENST00000379937 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
BRF1-203ENST00000379937 Q8N1Y9 231 aa11.69□□□□□ -0.54
BRF1-203ENST00000379937 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
BRF1-203ENST00000379937 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 PKD1L1Q8TDX9 2849 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 SNRPD3P62318 126 aaKnown RBP11.68□□□□□ -0.54
BRF1-203ENST00000379937 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
BRF1-203ENST00000379937 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 DLEU1O43261 78 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 PSMB8P28062 276 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 COL5A1-AS1Q5SY13 56 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 USMG5Q96IX5 58 aa11.68□□□□□ -0.54
BRF1-203ENST00000379937 A0A0U1RRA0 63 aa11.67□□□□□ -0.54
BRF1-203ENST00000379937 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
BRF1-203ENST00000379937 SLC25A16P16260 332 aa11.67□□□□□ -0.54
BRF1-203ENST00000379937 CD28P10747 220 aa11.67□□□□□ -0.54
BRF1-203ENST00000379937 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 CD5LO43866 347 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
BRF1-203ENST00000379937 MYOZ3Q8TDC0 251 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 CITED2Q99967 270 aaPredicted RBP11.66□□□□□ -0.54
BRF1-203ENST00000379937 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 LINC01587Q99440 93 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
BRF1-203ENST00000379937 ID1P41134 155 aa11.65□□□□□ -0.54
BRF1-203ENST00000379937 DUSP14O95147 198 aaKnown RBP11.65□□□□□ -0.54
BRF1-203ENST00000379937 NPC2P61916 151 aa11.65□□□□□ -0.54
BRF1-203ENST00000379937 MRPL16Q9NX20 251 aaKnown RBP11.65□□□□□ -0.54
BRF1-203ENST00000379937 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.55
BRF1-203ENST00000379937 CR1P17927 2039 aa11.64□□□□□ -0.55
BRF1-203ENST00000379937 H7C2G1 150 aa11.64□□□□□ -0.55
BRF1-203ENST00000379937 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms