RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SMKR1H3BMG3 65 aa14.64□□□□□ -0.07
SSU72-204ENST00000378726 KHDC1LQ5JSQ8 128 aa14.64□□□□□ -0.07
SSU72-204ENST00000378726 FABP5P3A8MUU1 101 aa14.64□□□□□ -0.07
SSU72-204ENST00000378726 LY6G6DO95868 133 aa14.64□□□□□ -0.07
SSU72-204ENST00000378726 TCTAP57738 103 aa14.64□□□□□ -0.07
SSU72-204ENST00000378726 OVOL1O14753 267 aa14.63□□□□□ -0.07
SSU72-204ENST00000378726 RNASE1P07998 156 aaKnown RBP14.63□□□□□ -0.07
SSU72-204ENST00000378726 WFDC3Q8IUB2 231 aa14.63□□□□□ -0.07
SSU72-204ENST00000378726 OR11H1Q8NG94 326 aa14.63□□□□□ -0.07
SSU72-204ENST00000378726 ZNF418Q8TF45 676 aaPredicted RBP14.63□□□□□ -0.07
SSU72-204ENST00000378726 SLURP1P55000 103 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 CACNG7P62955 275 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 TMEM97Q5BJF2 176 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 LINC01619G3V211 115 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 DEFB1P60022 68 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 HIST2H2BDQ6DRA6 164 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 C4orf3Q8WVX3 66 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 DPF1Q92782 380 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 HIVEP2P31629 2446 aa14.62□□□□□ -0.07
SSU72-204ENST00000378726 NPYP01303 97 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 LGALS9BQ3B8N2 356 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 LGALS9CQ6DKI2 356 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 ZNF575Q86XF7 245 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 OR10J6PQ8NGY7 276 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 DCANP1Q8TF63 244 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 LINC00477Q96M19 166 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 TWIST1Q15672 202 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 OR1N2Q8NGR9 330 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 DUX3Q96PT4 197 aa14.61□□□□□ -0.07
SSU72-204ENST00000378726 C7orf71A4D174 169 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 HBDP02042 147 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 ORM1P02763 201 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 CKS2P33552 79 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 ID1P41134 155 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 SEC11AP67812 179 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 FER1L6-AS1Q8NA97 138 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 KLHL30-AS1Q8NEE0 82 aa14.6□□□□□ -0.07
SSU72-204ENST00000378726 OTOGQ6ZRI0 2925 aa14.59□□□□□ -0.07
SSU72-204ENST00000378726 F6UB75 175 aa14.59□□□□□ -0.07
SSU72-204ENST00000378726 HILS1P60008 231 aa14.59□□□□□ -0.07
SSU72-204ENST00000378726 SAMD13Q5VXD3 122 aa14.59□□□□□ -0.07
SSU72-204ENST00000378726 C11orf44Q8N8P7 122 aa14.59□□□□□ -0.07
SSU72-204ENST00000378726 GAGE10A6NGK3 116 aa14.58□□□□□ -0.07
SSU72-204ENST00000378726 LINC01006Q8NI28 216 aa14.58□□□□□ -0.07
SSU72-204ENST00000378726 MSRB1Q9NZV6 116 aa14.58□□□□□ -0.07
SSU72-204ENST00000378726 IGLC6P0CF74 106 aa14.58□□□□□ -0.08
SSU72-204ENST00000378726 SRSF2Q01130 221 aaKnown RBP14.58□□□□□ -0.08
SSU72-204ENST00000378726 BOD1L2Q8IYS8 172 aa14.58□□□□□ -0.08
SSU72-204ENST00000378726 IFI27L1Q96BM0 104 aa14.58□□□□□ -0.08
SSU72-204ENST00000378726 C16orf95Q9H693 158 aa14.58□□□□□ -0.08
SSU72-204ENST00000378726 LENEPQ9Y5L5 61 aa14.58□□□□□ -0.08
SSU72-204ENST00000378726 ADAMTSL5Q6ZMM2 481 aa14.57□□□□□ -0.08
SSU72-204ENST00000378726 GTF2H5Q6ZYL4 71 aa14.57□□□□□ -0.08
SSU72-204ENST00000378726 GAS8-AS1O95177 125 aa14.56□□□□□ -0.08
SSU72-204ENST00000378726 WFDC12Q8WWY7 111 aa14.56□□□□□ -0.08
SSU72-204ENST00000378726 RNF185Q96GF1 192 aa14.56□□□□□ -0.08
SSU72-204ENST00000378726 CD28P10747 220 aa14.56□□□□□ -0.08
SSU72-204ENST00000378726 DLX4Q92988 240 aaPredicted RBP14.55□□□□□ -0.08
SSU72-204ENST00000378726 DKK2Q9UBU2 259 aa14.55□□□□□ -0.08
SSU72-204ENST00000378726 LINC01559Q495D7 138 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 UFSP1Q6NVU6 142 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 OR9G4Q8NGQ1 327 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 AP1S3Q96PC3 154 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 C11orf21Q9P2W6 132 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 PEMTQ9UBM1 199 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 J3KRW8 73 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 K7EQG2 157 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 ZNF688P0C7X2 276 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 Q6ZQT7 251 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 PCP2Q8IVA1 136 aa14.54□□□□□ -0.08
SSU72-204ENST00000378726 IGKV3D-20A0A0C4DH25 116 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 H3BRM9 83 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 SNRPD3P62318 126 aaKnown RBP14.53□□□□□ -0.08
SSU72-204ENST00000378726 PRR9Q5T870 116 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 C18orf15Q96N68 181 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 JMJD8Q96S16 334 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 A0A1W2PRX2 142 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 A6NDN8 102 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 C9orf118A6NHY6 69 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 NMUP48645 174 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 PSMG4Q5JS54 123 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 ZFAND2AQ8N6M9 145 aa14.53□□□□□ -0.08
SSU72-204ENST00000378726 TMEM238C9JI98 176 aa14.52□□□□□ -0.08
SSU72-204ENST00000378726 SAP30O75446 220 aa14.52□□□□□ -0.08
SSU72-204ENST00000378726 FAM19A4Q96LR4 140 aa14.52□□□□□ -0.08
SSU72-204ENST00000378726 NAA38Q9BRA0 125 aaKnown RBP14.52□□□□□ -0.08
SSU72-204ENST00000378726 SETD2Q9BYW2 2564 aaPredicted RBP14.52□□□□□ -0.09
SSU72-204ENST00000378726 RAX2Q96IS3 184 aa14.51□□□□□ -0.09
SSU72-204ENST00000378726 CITED2Q99967 270 aaPredicted RBP14.51□□□□□ -0.09
SSU72-204ENST00000378726 HSD52Q0P140 79 aa14.51□□□□□ -0.09
SSU72-204ENST00000378726 MAP1LC3AQ9H492 121 aa14.51□□□□□ -0.09
SSU72-204ENST00000378726 G3V4G9 280 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 EVI2AP22794 236 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 KIR3DS1Q14943 382 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 INAFM1C9JVW0 142 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 SIVA1O15304 175 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 GATA1P15976 413 aaPredicted RBP14.5□□□□□ -0.09
SSU72-204ENST00000378726 LEPP41159 167 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 CNFNQ9BYD5 112 aa14.5□□□□□ -0.09
SSU72-204ENST00000378726 TSSC4Q9Y5U2 329 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms