RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 KLK5Q9Y337 293 aaPredicted RBP8.29□□□□□ -1.08
DEPDC4-202ENST00000378244 K7EN84 100 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 SFTA3P0C7M3 94 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 PEA15Q15121 130 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 ZNF575Q86XF7 245 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 MUC21A0A0G2JKD1 596 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 MUC21A0A140T8X8 626 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 CLLU1Q5K131 121 aa8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
DEPDC4-202ENST00000378244 M0R2P5 195 aa8.27□□□□□ -1.09
DEPDC4-202ENST00000378244 GZMBP10144 247 aa8.27□□□□□ -1.09
DEPDC4-202ENST00000378244 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
DEPDC4-202ENST00000378244 LINC00612Q8N6U2 182 aa8.27□□□□□ -1.09
DEPDC4-202ENST00000378244 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.09
DEPDC4-202ENST00000378244 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 HOXA5P20719 270 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 PCP4P48539 62 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 A0A0J9YY99 117 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 P01737 135 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 TMEM88Q6PEY1 159 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 RASL10AQ92737 203 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 SMIM12Q96EX1 92 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 C9orf85Q96MD7 179 aa8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
DEPDC4-202ENST00000378244 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 M0R381 172 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 IL36BQ9NZH7 164 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 PHLDA3Q9Y5J5 127 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 NACAE9PAV3 2078 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 MUC4Q99102 2169 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 IGHV3-73A0A0B4J1V6 119 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 C19orf71A6NCJ1 209 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 POM121L12Q8N7R1 296 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 LYSTQ99698 3801 aa8.25□□□□□ -1.09
DEPDC4-202ENST00000378244 ERVFC1-1P60608 527 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 SOHLH1Q5JUK2 328 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 LINC01551Q86U37 167 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 OR4C5Q8NGB2 326 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 JPT2Q9H910 190 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 TMEM241Q24JQ0 296 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
DEPDC4-202ENST00000378244 TRGV4A0A0C4DH28 118 aa8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 NUDT3O95989 172 aa8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 ADIRFQ15847 76 aa8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 SMDT1Q9H4I9 107 aa8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
DEPDC4-202ENST00000378244 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
DEPDC4-202ENST00000378244 C18orf15Q96N68 181 aa8.22□□□□□ -1.09
DEPDC4-202ENST00000378244 APLNQ9ULZ1 77 aa8.22□□□□□ -1.09
DEPDC4-202ENST00000378244 FHL2Q14192 279 aa8.21□□□□□ -1.09
DEPDC4-202ENST00000378244 CFAP126Q5VTH2 177 aa8.21□□□□□ -1.09
DEPDC4-202ENST00000378244 SAMD10Q9BYL1 202 aa8.21□□□□□ -1.09
DEPDC4-202ENST00000378244 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.09
DEPDC4-202ENST00000378244 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.09
DEPDC4-202ENST00000378244 A0A087WWL8 130 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 LY6G6CO95867 125 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 RPL23P62829 140 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 FAM74A3Q4VXF1 159 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 DNLZQ5SXM8 178 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 SPANXN1Q5VSR9 72 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 FER1L6-AS1Q8NA97 138 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 SCRT2Q9NQ03 307 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
DEPDC4-202ENST00000378244 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
DEPDC4-202ENST00000378244 GATCO43716 136 aaKnown RBP8.2□□□□□ -1.1
DEPDC4-202ENST00000378244 SYT8Q8NBV8 401 aa8.2□□□□□ -1.1
DEPDC4-202ENST00000378244 VSIG2Q96IQ7 327 aa8.2□□□□□ -1.1
DEPDC4-202ENST00000378244 LY96Q9Y6Y9 160 aa8.2□□□□□ -1.1
DEPDC4-202ENST00000378244 A0A096LPF7 62 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 PAX4O43316 350 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 LYZL1Q6UWQ5 148 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 COMMD7Q86VX2 200 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 ZFP82Q8N141 532 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 SSBP4Q9BWG4 385 aaPredicted RBP8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 MSRB1Q9NZV6 116 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 RS1O15537 224 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 OR5AL1P0C617 328 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
DEPDC4-202ENST00000378244 A8MWV9 139 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 SNAI2O43623 268 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 CRYBA4P53673 196 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms