RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PRSS1P07477 247 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 IGHV1-3A0A0C4DH29 117 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 LY6HO94772 140 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 DPM2O94777 84 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 KLRB1Q12918 225 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 H3BTX0 84 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 UBE2D1P51668 147 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 ZZEF1O43149 2961 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 GP9P14770 177 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
FXN-201ENST00000377270 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 ORMDL3Q8N138 153 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 DCHS2Q6V1P9 2916 aa11.98□□□□□ -0.49
FXN-201ENST00000377270 LINC01619G3V211 115 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 ADORA2A-AS1P86434 159 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 RUSC1-AS1Q66K80 236 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 Q71RC1 249 aaPredicted RBP11.97□□□□□ -0.49
FXN-201ENST00000377270 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 ZNF785A8K8V0 405 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 FOXC2Q99958 501 aa11.97□□□□□ -0.49
FXN-201ENST00000377270 TRAV40A0A0B4J280 105 aa11.96□□□□□ -0.49
FXN-201ENST00000377270 EBI3Q14213 229 aa11.96□□□□□ -0.49
FXN-201ENST00000377270 TWIST1Q15672 202 aa11.96□□□□□ -0.49
FXN-201ENST00000377270 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
FXN-201ENST00000377270 IGHV3-21A0A0B4J1V1 117 aa11.96□□□□□ -0.5
FXN-201ENST00000377270 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.5
FXN-201ENST00000377270 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.5
FXN-201ENST00000377270 OTORQ9NRC9 128 aa11.96□□□□□ -0.5
FXN-201ENST00000377270 SPTBN4Q9H254 2564 aa11.96□□□□□ -0.5
FXN-201ENST00000377270 LGALS9O00182 355 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 MRPS12O15235 138 aaKnown RBP11.95□□□□□ -0.5
FXN-201ENST00000377270 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 TMEM86BQ8N661 226 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 hADV29S1A0JD25 119 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 NCBP2LA6PVI3 153 aaKnown RBP11.95□□□□□ -0.5
FXN-201ENST00000377270 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
FXN-201ENST00000377270 CRYGAP11844 174 aa11.94□□□□□ -0.5
FXN-201ENST00000377270 COX7CP15954 63 aa11.94□□□□□ -0.5
FXN-201ENST00000377270 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
FXN-201ENST00000377270 TRBV6-1A0A0K0K1D8 114 aa11.94□□□□□ -0.5
FXN-201ENST00000377270 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
FXN-201ENST00000377270 CYSTM1Q9H1C7 97 aa11.94□□□□□ -0.5
FXN-201ENST00000377270 DTX2Q86UW9 622 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 TRACP01848 142 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 RPL13AP40429 203 aaKnown RBP11.93□□□□□ -0.5
FXN-201ENST00000377270 PLGLAQ15195 96 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
FXN-201ENST00000377270 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 ABCA1O95477 2261 aa11.93□□□□□ -0.5
FXN-201ENST00000377270 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
FXN-201ENST00000377270 TEX22C9J3V5 150 aa11.92□□□□□ -0.5
FXN-201ENST00000377270 LY6LH3BQJ8 138 aa11.92□□□□□ -0.5
FXN-201ENST00000377270 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
FXN-201ENST00000377270 ARHGAP32A7KAX9 2087 aa11.92□□□□□ -0.5
FXN-201ENST00000377270 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
FXN-201ENST00000377270 MRPL35Q9NZE8 188 aaKnown RBP11.91□□□□□ -0.5
FXN-201ENST00000377270 ZNF256Q9Y2P7 627 aaPredicted RBP11.91□□□□□ -0.5
FXN-201ENST00000377270 H3BMM0 161 aa11.91□□□□□ -0.5
FXN-201ENST00000377270 LYZL1Q6UWQ5 148 aa11.91□□□□□ -0.5
FXN-201ENST00000377270 UBE2WQ96B02 151 aa11.91□□□□□ -0.5
FXN-201ENST00000377270 CKS2P33552 79 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
FXN-201ENST00000377270 A0A1W2PRX2 142 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 CRIP1P50238 77 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 TMEM258P61165 79 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.5
FXN-201ENST00000377270 FAM236DA0A1B0GTK5 79 aa11.9□□□□□ -0.51
FXN-201ENST00000377270 FAM236CP0DP71 79 aa11.9□□□□□ -0.51
FXN-201ENST00000377270 LEPP41159 167 aa11.9□□□□□ -0.51
FXN-201ENST00000377270 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 RNF5Q99942 180 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
FXN-201ENST00000377270 DPM3Q9P2X0 92 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
FXN-201ENST00000377270 SPTBN1Q01082 2364 aaKnown RBP11.89□□□□□ -0.51
FXN-201ENST00000377270 C11orf71Q6IPW1 123 aa11.88□□□□□ -0.51
FXN-201ENST00000377270 NDUFA3O95167 84 aa11.88□□□□□ -0.51
FXN-201ENST00000377270 PFN2P35080 140 aa11.88□□□□□ -0.51
FXN-201ENST00000377270 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
FXN-201ENST00000377270 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
FXN-201ENST00000377270 TRAV41A0A0B4J266 112 aa11.87□□□□□ -0.51
FXN-201ENST00000377270 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
FXN-201ENST00000377270 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
FXN-201ENST00000377270 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
FXN-201ENST00000377270 J3QQQ9 107 aa11.86□□□□□ -0.51
FXN-201ENST00000377270 HERVK_113P61574 105 aa11.86□□□□□ -0.51
FXN-201ENST00000377270 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
FXN-201ENST00000377270 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
FXN-201ENST00000377270 I3L2K1 104 aa11.86□□□□□ -0.51
FXN-201ENST00000377270 ZNF22P17026 224 aaPredicted RBP11.86□□□□□ -0.51
FXN-201ENST00000377270 LYZP61626 148 aa11.86□□□□□ -0.51
FXN-201ENST00000377270 TRAV13-1A0A0B4J241 112 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms