RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 K7EP13 123 aa12.12□□□□□ -0.47
IRF3-202ENST00000377135 CRIP1P50238 77 aa12.12□□□□□ -0.47
IRF3-202ENST00000377135 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
IRF3-202ENST00000377135 A0A0D9SG52 128 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 ASIPP42127 132 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 KRTAP10-2P60368 255 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 ZNF345Q14585 488 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 LGALSLQ3ZCW2 172 aaPredicted RBP12.11□□□□□ -0.47
IRF3-202ENST00000377135 Q86TA4 180 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 SFT2D1Q8WV19 159 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 B4DEV8 164 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 TIRAPP58753 221 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 UBE2G1P62253 170 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 RHOHQ15669 191 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
IRF3-202ENST00000377135 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 EREGO14944 169 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 ZC2HC1AQ96GY0 325 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 ZNF471Q9BX82 626 aaPredicted RBP12.1□□□□□ -0.47
IRF3-202ENST00000377135 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 RYR1P21817 5038 aa12.1□□□□□ -0.47
IRF3-202ENST00000377135 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 KANTRA0A1W2PQU2 76 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 A8MWV9 139 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 KRBOX1C9JBD0 128 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 PAGE4O60829 102 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 CDK2AP2O75956 126 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 MGST1P10620 155 aaKnown RBP12.09□□□□□ -0.47
IRF3-202ENST00000377135 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
IRF3-202ENST00000377135 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 M0R036 132 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 SH2D1AO60880 128 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 CRYGDP07320 174 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 Q6ZSN1 163 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
IRF3-202ENST00000377135 TRBV6-1A0A0K0K1D8 114 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 A0A1B0GV50 99 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 EIF5AP63241 154 aaKnown RBP12.07□□□□□ -0.48
IRF3-202ENST00000377135 ATP6V0E2Q8NHE4 81 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 PARLQ9H300 379 aa12.07□□□□□ -0.48
IRF3-202ENST00000377135 BCL2L11O43521 198 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 DNLZQ5SXM8 178 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 JPT2Q9H910 190 aa12.06□□□□□ -0.48
IRF3-202ENST00000377135 H3BVH4 76 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 LTAP01374 205 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 H2AFB1P0C5Y9 115 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 AKR1C3P42330 323 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 ZNF674Q2M3X9 581 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 GTSF1LQ9H1H1 148 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
IRF3-202ENST00000377135 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
IRF3-202ENST00000377135 PFDN1O60925 122 aa12.04□□□□□ -0.48
IRF3-202ENST00000377135 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
IRF3-202ENST00000377135 SAMD10Q9BYL1 202 aa12.04□□□□□ -0.48
IRF3-202ENST00000377135 PHLDA3Q9Y5J5 127 aa12.04□□□□□ -0.48
IRF3-202ENST00000377135 HSPG2P98160 4391 aa12.04□□□□□ -0.48
IRF3-202ENST00000377135 A0A087WTM6 91 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 LELP1Q5T871 98 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 TPT1P13693 172 aaKnown RBP12.03□□□□□ -0.48
IRF3-202ENST00000377135 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
IRF3-202ENST00000377135 GAGE1Q13065 139 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 GAGE4Q13068 117 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 GAGE5Q13069 117 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
IRF3-202ENST00000377135 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 BAGE2Q86Y30 109 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 MAPKAPK5-AS1Q8N8E1 139 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 Q9UF83 564 aa12.02□□□□□ -0.49
IRF3-202ENST00000377135 M0R381 172 aa12.01□□□□□ -0.49
IRF3-202ENST00000377135 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
IRF3-202ENST00000377135 IGHV3-33P01772 117 aa12.01□□□□□ -0.49
IRF3-202ENST00000377135 IGHV3-30-3P0DP02 117 aa12.01□□□□□ -0.49
IRF3-202ENST00000377135 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
IRF3-202ENST00000377135 C14orf178Q8N769 122 aaPredicted RBP12.01□□□□□ -0.49
IRF3-202ENST00000377135 SCRT2Q9NQ03 307 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms